RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 RARBP10826 455 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 BTKQ06187 659 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 MORF4L2Q15014 288 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 CHI3L2Q15782 390 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 LIN52Q52LA3 116 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 RNASEH2BQ5TBB1 312 aaKnown RBP15.37■□□□□ 0.05
COL6A2-201ENST00000300527 FAXCQ5TGI0 409 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 FAM71DQ8N9W8 422 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 SLITRK1Q96PX8 696 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 SPATA16Q9BXB7 569 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 PCDHB2Q9Y5E7 798 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 YWHABP31946 246 aaKnown RBP15.36■□□□□ 0.05
COL6A2-201ENST00000300527 ASPHQ12797 758 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 KBTBD12Q3ZCT8 623 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 SPOCD1Q6ZMY3 1216 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 APLFQ8IW19 511 aaPredicted RBP15.36■□□□□ 0.05
COL6A2-201ENST00000300527 PDIK1LQ8N165 341 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 ACTL9Q8TC94 416 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 IFT43Q96FT9 208 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 KCNK13Q9HB14 408 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 PREBQ9HCU5 417 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 DMAP1Q9NPF5 467 aaPredicted RBP15.36■□□□□ 0.05
COL6A2-201ENST00000300527 PI4KBQ9UBF8 816 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 ARFGEF1Q9Y6D6 1849 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 PRR5-ARHGAP8B1AHC4 643 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 TRIM49D1C9J1S8 452 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 HNRNPRO43390 633 aaKnown RBP15.36■□□□□ 0.05
COL6A2-201ENST00000300527 TOM1L1O75674 476 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 SORBS2O94875 1100 aaKnown RBP15.36■□□□□ 0.05
COL6A2-201ENST00000300527 ARHGAP8P85298 464 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 OTUD4Q01804 1114 aaKnown RBP15.36■□□□□ 0.05
COL6A2-201ENST00000300527 PEX6Q13608 980 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 KATNAL2Q8IYT4 538 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 HIC2Q96JB3 615 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 FAM81BQ96LP2 452 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 SLC7A8Q9UHI5 535 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 DOT1LQ8TEK3 1739 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 VCPP55072 806 aaKnown RBP15.36■□□□□ 0.05
COL6A2-201ENST00000300527 UGCGQ16739 394 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 EFHC2Q5JST6 749 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 DNAJC24Q6P3W2 148 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 SATL1Q86VE3 508 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 TDRPQ86YL5 185 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 BANPQ8N9N5 519 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 IL31RAQ8NI17 732 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 FEZF2Q8TBJ5 459 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 SKA1Q96BD8 255 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 APOL6Q9BWW8 343 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 KCNH7Q9NS40 1196 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 DDX18Q9NVP1 670 aaKnown RBP15.36■□□□□ 0.05
COL6A2-201ENST00000300527 LMCD1Q9NZU5 365 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 TBX20Q9UMR3 447 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 SLC4A7Q9Y6M7 1214 aa15.36■□□□□ 0.05
COL6A2-201ENST00000300527 LOC100653049A0A140TA62 436 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 CST8O60676 142 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 KRT34O76011 436 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
COL6A2-201ENST00000300527 DLDP09622 509 aaKnown RBP15.35■□□□□ 0.05
COL6A2-201ENST00000300527 ELK3P41970 407 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 DMP1Q13316 513 aaPredicted RBP15.35■□□□□ 0.05
COL6A2-201ENST00000300527 TRIP10Q15642 601 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 KLHL38Q2WGJ6 581 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 TMEM179Q6ZVK1 233 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 RSPH3Q86UC2 560 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 TRIM11Q96F44 468 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 MPP4Q96JB8 637 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 TMX4Q9H1E5 349 aaPredicted RBP15.35■□□□□ 0.05
COL6A2-201ENST00000300527 HLA-DRAP01903 254 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 ATP6V1B1P15313 513 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 EIF2AK2P19525 551 aaKnown RBP15.35■□□□□ 0.05
COL6A2-201ENST00000300527 GPC3P51654 580 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 ATXN3P54252 364 aaPredicted RBP15.35■□□□□ 0.05
COL6A2-201ENST00000300527 CMPK2Q5EBM0 449 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 SENP7Q9BQF6 1050 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 EXOC7Q9UPT5 735 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 SMCHD1A6NHR9 2005 aa15.35■□□□□ 0.05
COL6A2-201ENST00000300527 E2F8A0AVK6 867 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 F5H423 210 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 ITGB5P18084 799 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 BST1Q10588 318 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 MED21Q13503 144 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 SPATA31A5Q5VU36 1347 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 SPATA31A6Q5VVP1 1343 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 CDHR3Q6ZTQ4 885 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 SPATA24Q86W54 205 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 TMPRSS6Q8IU80 811 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 SPATA31A7Q8IWB4 1347 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 RCOR2Q8IZ40 523 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 VPS11Q9H270 941 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 EHMT1Q9H9B1 1298 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 RPL26L1Q9UNX3 145 aaKnown RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 ATAD5Q96QE3 1844 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 IQANK1A0A1B0GTG1 560 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 KBTBD13C9JR72 458 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 ZMPSTE24O75844 475 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 TOP3BO95985 862 aaKnown RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 C6orf222P0C671 652 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 QARSP47897 775 aaKnown RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 NPTX2P47972 431 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms