RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 IL1RL2Q9HB29 575 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 APOA4P06727 396 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 UCHL3P15374 230 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 MMRN1Q13201 1228 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 NEDD8Q15843 81 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 RBBP7Q16576 425 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 CCDC153Q494R4 210 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 RWDD4Q6NW29 188 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 FGD2Q7Z6J4 655 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 DGKHQ86XP1 1220 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 A1CFQ9NQ94 594 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 V9GYQ6 96 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 NEDD4P46934 1319 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZNF197O14709 1029 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 SMNDC1O75940 238 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 BNC1Q01954 994 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 NR1D2Q14995 579 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 NCF4Q15080 339 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 CYB5R4Q7L1T6 521 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 RDM1Q8NG50 284 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 PDCD6IPQ8WUM4 868 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 FAM84BQ96KN1 310 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 CCDC28BQ9BUN5 200 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 TRIM54Q9BYV2 358 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 PLAGL2Q9UPG8 496 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 PRELID1Q9Y255 219 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 AK5Q9Y6K8 562 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 EVPLLA8MZ36 301 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 PSMG1O95456 288 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 AQP5P55064 265 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 GTF2H3Q13889 308 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 ARHGEF6Q15052 776 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 PFKFB3Q16875 520 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 CYP4A22Q5TCH4 519 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 SLC44A5Q8NCS7 719 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 RNF139Q8WU17 664 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 CNOT7Q9UIV1 285 aaKnown RBP13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 DIP2BQ9P265 1576 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 POTEMA6NI47 508 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 TFE3P19532 575 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 COBLL1Q53SF7 1204 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 DCPSQ96C86 337 aaKnown RBP13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZSCAN32Q9NX65 697 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 TUBGCP4Q9UGJ1 667 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 ATP9BO43861 1147 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 BMP3P12645 472 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 FASP25445 335 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 SOX11P35716 441 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 PEX3P56589 373 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 CTTNQ14247 550 aaKnown RBP13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 TSGA10IPQ3SY00 556 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 GADL1Q6ZQY3 521 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 SH3BP5LQ7L8J4 393 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 KRT35Q92764 455 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 B3GALT6Q96L58 329 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 RPRD1BQ9NQG5 326 aaKnown RBP13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 PAK5Q9P286 719 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZC3H13Q5T200 1668 aaKnown RBP13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 SYNDIG1LA6NDD5 238 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 AREL1O15033 823 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 SEMA3DO95025 777 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 ALOX5P09917 674 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 PTDSS1P48651 473 aaKnown RBP13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 TRAF3Q13114 568 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 ITGA9Q13797 1035 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 PDIA6Q15084 440 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 DEFB107AQ8IZN7 70 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 OXER1Q8TDS5 423 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 PGBD4Q96DM1 585 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 CDHR1Q96JP9 859 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 DCP1AQ9NPI6 582 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 RIC8BQ9NVN3 520 aa13.67□□□□□ -0.22
PCDHGA3-201ENST00000253812 UTYO14607 1347 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 SNTNA6NMZ2 147 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 MATN2O00339 956 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 PDXKO00764 312 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 APOL1O14791 398 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 KCNN4O15554 427 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 CYTH3O43739 400 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 FCER1AP12319 257 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 MCL1Q07820 350 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 DPYDQ12882 1025 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 VPS72Q15906 364 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 FBXO25Q8TCJ0 367 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 BTN2A2Q8WVV5 523 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 FAR2Q96K12 515 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 ERGIC2Q96RQ1 377 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 STAP1Q9ULZ2 295 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 RPL26L1Q9UNX3 145 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 C5orf58C9J3I9 102 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 COMTP21964 271 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 RECQLP46063 649 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 EGFL6Q8IUX8 553 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 ITFG2Q969R8 447 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 IFT43Q96FT9 208 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms