RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Creld2Q9CYA0 350 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Trmt44Q9D2Q2 713 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rexo5D3YW29 759 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 MaffO54791 156 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ccng1P51945 294 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gpd1lQ3ULJ0 351 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ccna1Q61456 421 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 LdhdQ7TNG8 484 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Thnsl1Q8BH55 747 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CalcbQ99MP3 130 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Trp53inp1Q9QXE4 239 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gpc1Q9QZF2 557 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Setd1aE9PYH6 1716 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 AceP09470 1312 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 SftpdP50404 374 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tmem120bQ3TA38 339 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zfp341Q6PGC9 846 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PolrmtQ8BKF1 1207 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gramd1aQ8VEF1 722 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Olfr449Q8VGW8 311 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Npm3Q9CPP0 175 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Sars2Q9JJL8 518 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Spag6Q9JLI7 507 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 SpastQ9QYY8 614 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nfe2l3Q9WTM4 660 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Kif20bQ80WE4 1774 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pds5aQ6A026 1332 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slc9a6A1L3P4 702 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Clrn2B2RVW2 232 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm6465F7A7Y6 181 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Snx12O70493 165 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Bpifb5Q3UQ05 490 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PighQ5M9N4 188 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Otud6aQ6IE21 290 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 E2f7Q6S7F2 904 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 HmcesQ8R1M0 353 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hic2Q9JLZ6 619 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Sh2d3cQ9QZS8 854 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ruvbl2Q9WTM5 463 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Usp42B2RQC2 1324 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ass1P16460 412 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ube2oQ6ZPJ3 1288 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cyfip1Q7TMB8 1253 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Olfr698Q7TRN4 311 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Enoph1Q8BGB7 257 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 ItchQ8C863 864 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Prpf3Q922U1 683 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Telo2Q9DC40 840 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tlr9Q9EQU3 1032 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dnaja4Q9JMC3 397 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Sae1Q9R1T2 350 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mapk9Q9WTU6 423 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm43638A0A0J9YU36 694 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm10406A6NAS4 205 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm3373A6NAS7 205 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm3298E9PW80 205 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 C2cd2E9Q3C1 696 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm3667K7N757 205 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PdynO35417 248 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Usp53P15975 1069 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 RargP18911 458 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Sult1e1P49891 295 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Vbp1P61759 196 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 NyxP83503 476 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm3558Q5FWC9 205 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Als2clQ60I26 952 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 SnrpaQ62189 287 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Atg16l2Q6KAU8 623 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ireb2Q811J3 963 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Phka2Q8BWJ3 1235 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 N4bp2l2Q8JZS6 575 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nup85Q8R480 656 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dnajc28Q8VCE1 385 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nsmce2Q91VT1 247 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Eif3mQ99JX4 374 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nipsnap3bQ9CQE1 247 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Fam227aQ9D3V8 625 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm7145A0A087WS64 360 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Atp8b4A2ANX3 1194 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Srpk1O70551 648 aaKnown RBP9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Chst3O88199 472 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Kansl2Q8BQR4 486 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pdzd9Q9D9M4 266 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pcdhb9E9Q5G2 828 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Clk2O35491 499 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 UrosP51163 265 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dynll1P63168 89 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CluQ06890 448 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 HexdcQ3U4H6 486 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Trim67Q505D9 768 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Lrrc27Q80YS5 523 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Noc4lQ8BHY2 516 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tph2Q8CGV2 488 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Defb15Q8R2I5 79 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cpa5Q8R4H4 436 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Aldh1a3Q9JHW9 512 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Msh6P54276 1358 aaKnown RBP9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 MyrfQ3UR85 1138 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 SnphQ80U23 495 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Llgl1Q80Y17 1036 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 65.1 ms