RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Vmn1r206Q8R277 312 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Irs2P81122 1321 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tmem45a2B7ZWJ5 289 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zw10O54692 779 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 CrymO54983 313 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tsr1Q5SWD9 803 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Olfr1037Q7TR84 321 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Acsf2Q8VCW8 615 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Chn1Q91V57 459 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ppef2O35385 757 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 IppP28575 584 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Wdr48Q8BH57 676 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Chmp2bQ8BJF9 213 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 RnpepQ8VCT3 650 aaKnown RBP19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Trim12aQ99PQ1 284 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ubxn11Q9D572 484 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Alg13Q9D8C3 1166 aaKnown RBP19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ppm1aP49443 382 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ago4Q8CJF8 861 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Spg21Q9CQC8 308 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Pramef12Q9D2F1 463 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ccdc182Q9D9C6 152 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cdc42ep4Q9JM96 349 aaKnown RBP19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tmigd3G3X8R9 209 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Neurl1bQ0MW30 546 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Dcun1d2Q8BZJ7 259 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Epc1Q8C9X6 813 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Nrif2Q921B4 824 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Thg1lQ9CY52 298 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zfand4D3Z3C6 739 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Vmn2r71L7N2D8 855 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 PtgisO35074 501 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Rpusd2Q149F1 553 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Wdr41Q3UDP0 460 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 A1cfQ5YD48 595 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cnot10Q8BH15 744 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Fbxl13Q8CDU4 790 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Armt1A6H630 439 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Fgf15O35622 218 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Sars2Q9JJL8 518 aa19.23■□□□□ 0.67
Sort1-203ENSMUST00000135636 Sdccag3A2AIW0 432 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Phactr4Q501J7 694 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 H2afy2Q8CCK0 372 aaKnown RBP19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gdap1l1Q8VE33 370 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cables1Q9ESJ1 568 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Itih1Q61702 907 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gja6Q6S5G4 283 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tada3Q8R0L9 432 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 FanceB8JJD6 213 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Wscd2D4PHA7 571 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Alkbh1P0CB42 389 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gsta3P30115 221 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Anxa4P97429 319 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 DaglaQ6WQJ1 1044 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 2010300C02RikE9Q3M9 1175 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Rgs4O08899 205 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Sipa1P46062 1037 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 EsrrgP62509 458 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tbc1d1Q60949 1255 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Znf512Q69Z99 562 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cdkn2aipQ8BI72 563 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 PtprcP06800 1291 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Trim43aQ3TL54 445 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Mical2Q8BML1 960 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Smg9Q9DB90 520 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 GakQ99KY4 1305 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Flt4P35917 1363 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 PcnaP17918 261 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Anks1aP59672 1150 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gucy2cQ3UWA6 1072 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Atp13a3Q5XF89 1219 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Spata20Q80YT5 790 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Bpifb6Q8BU51 449 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Q8C5C9 218 aa19.22■□□□□ 0.67
Sort1-203ENSMUST00000135636 Magea8O89012 320 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Scn2bQ56A07 215 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Actl9Q8CG27 415 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Fam151aQ8QZW3 608 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Nme5Q99MH5 211 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tdrd1Q99MV1 1172 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gpc1Q9QZF2 557 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Kpna6O35345 536 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zfy2P20662 777 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zfp953Q3UPV7 304 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Phf21aQ6ZPK0 659 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Trmt2aQ8BNV1 574 aaKnown RBP19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tgm5Q9D7I9 724 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Foxm1O08696 760 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Dsg1bQ7TSF1 1060 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tmem192Q9CXT7 266 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ddx56Q9D0R4 546 aaKnown RBP19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 MceeQ9D1I5 178 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gm10639E9Q6L7 222 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gsta2P10648 222 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Wnt10bP48614 389 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 MagohP61327 146 aaKnown RBP19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Colec11Q3SXB8 272 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ccdc84Q4VA36 332 aaKnown RBP19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ube3cQ80U95 1083 aa19.21■□□□□ 0.67
Sort1-203ENSMUST00000135636 MagohbQ9CQL1 146 aa19.21■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms