RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Nrif2Q921B4 824 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cstf3Q99LI7 717 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rprd1bQ9CSU0 326 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Nol3Q9D1X0 220 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Edf1Q9JMG1 148 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Chek2Q9Z265 546 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Adam7O35227 789 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 PurbO35295 324 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Klra1P20937 262 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 M6prP24668 278 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Msr1P30204 458 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Tsc22d1P62500 1077 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Pkn1P70268 946 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Fam169aQ5XG69 665 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Hoxa13Q62424 386 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Vps50Q8CI71 964 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cyp2c50Q91X77 490 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 NelfcdQ922L6 591 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Apobec3Q99J72 440 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Drg2Q9QXB9 364 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Pkp3Q9QY23 797 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Extl3Q9WVL6 918 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 RecqlQ9Z129 648 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 B020011L13RikA0A087WQI7 412 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ass1P16460 412 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Gnat1P20612 350 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Scg3P47867 471 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 NfibP97863 570 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rtkn2Q14B46 604 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Kiaa0319Q5SZV5 1081 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Q6GQU0 248 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Eif2s1Q6ZWX6 315 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ano5Q75UR0 904 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Lrfn2Q80TG9 788 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Dlg1Q811D0 905 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 4921511C20RikQ8BVT7 469 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Trip10Q8CJ53 603 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ube2sQ921J4 223 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Orc1Q9Z1N2 840 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Kdelc2G5E897 503 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Gm7942L7N277 499 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Efna5O08543 228 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Anxa5P48036 319 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ddx55Q6ZPL9 600 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Moxd2Q7TT41 619 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Slc39a11Q8BWY7 342 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Dnajc9Q91WN1 259 aaKnown RBP11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Q9CR55 154 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Golph3Q9CRA5 298 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 PpihQ9D868 188 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Dctn3Q9Z0Y1 186 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 Bub1bQ9Z1S0 1052 aa11.25□□□□□ -0.61
Ciita-201ENSMUST00000023147 C1dO35473 141 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Pon1P52430 355 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Fbxw10Q5SUS0 1030 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Arhgap15Q811M1 481 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Nim1kQ8BHI9 436 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Kirrel3Q8BR86 778 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Dcun1d2Q8BZJ7 259 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Trpv3Q8K424 791 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ascc2Q91WR3 749 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Sept12Q9D451 317 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Hsd3b7Q9EQC1 369 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Sh2b2Q9JID9 621 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mtmr1Q9Z2C4 669 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ccdc144bE9PVZ3 520 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Psmb9P28076 219 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 RetsatQ64FW2 609 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Znf618Q80YY7 953 aaKnown RBP11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Olfml3Q8BK62 406 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Wdr35Q8BND3 1181 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 AgpsQ8C0I1 645 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Klhl36Q8R124 613 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Psmd9Q9CR00 222 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Castor1Q9CWQ8 331 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mrto4Q9D0I8 239 aaKnown RBP11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Aff4Q9ESC8 1160 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Stau1Q9Z108 487 aaKnown RBP11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Bpifb9bA2AJD1 591 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Fam47eD3YWC7 402 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Xirp1O70373 1129 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Msh2P43247 935 aaKnown RBP11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cyp2e1Q05421 493 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Entpd7Q3TCT4 606 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Hist2h2acQ64523 129 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Hist2h2aa1Q6GSS7 130 aaKnown RBP11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Prrg3Q6PAQ9 231 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ssxb10Q6XAR7 170 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cyfip1Q7TMB8 1253 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ankzf1Q80UU1 748 aaKnown RBP11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Bpifb9aQ80XI7 591 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ppm1nQ8BGL1 404 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Gcfc2Q8BKT3 769 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 WdpcpQ8C456 722 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Tbc1d10cQ8C9V1 444 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mtss1Q8R1S4 759 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rnf8Q8VC56 488 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Zfp566Q8VCI1 386 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 PdynO35417 248 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Nmt1O70310 496 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms