RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Mmp13P33435 472 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 FerP70451 823 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mphosph8Q3TYA6 858 aaKnown RBP16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Oog3Q3UWY1 500 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Znf652Q5DU09 608 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gm11437Q5QR91 290 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 AmphQ7TQF7 686 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Slc17a6Q8BLE7 582 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Pcdhgb1Q91XX8 918 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Me2Q99KE1 589 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mms19Q9D071 1031 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Pdk2Q9JK42 407 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Kifc1Q9QWT9 674 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Pus7B7ZNL8 666 aaKnown RBP16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gm379J3QQ19 296 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Glud1P26443 558 aaKnown RBP16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Psmc1P62192 440 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 S100a5P63084 93 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Crnkl1P63154 690 aaKnown RBP16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 GmpsQ3THK7 693 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gm8773Q3UQ24 132 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gm13103Q4VAD2 491 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Txndc8Q69AB2 127 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Atl2Q6PA06 583 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Trmt13Q8BYH3 481 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Stxbp5Q8K400 1152 aaKnown RBP16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Fam49bQ921M7 324 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mfsd5Q921Y4 450 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Rnf112Q96DY5 654 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Tas1r1Q99PG6 842 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Rab11fip1Q9D620 645 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Piwil1Q9JMB7 862 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mta2Q9R190 668 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cetn2Q9R1K9 172 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Kmt2eQ3UG20 1868 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Ripor3A1L3T7 938 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Dusp8O09112 663 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Bcat1P24288 386 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Klf1P46099 358 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Smcr8Q3UMB5 935 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Parp6Q6P6P7 630 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Ccnt2Q7TQK0 723 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Znf598Q80YR4 908 aaKnown RBP16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Q8BHN7 327 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Hdac7Q8C2B3 938 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Krt20Q9D312 431 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 XdhQ00519 1335 aa16.96■□□□□ 0.3
Trim28-201ENSMUST00000005705 Plcg1Q62077 1302 aa16.96■□□□□ 0.3
Trim28-201ENSMUST00000005705 Bcorl1A2AQH4 1781 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tatdn2B7ZNL9 783 aaKnown RBP16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Lipo2D3YY49 398 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Mtco1P00397 514 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Gjb3P28231 270 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Rab20P35295 233 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Akr1b8P45377 316 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Rasgrf2P70392 1189 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Lrch2Q3UMG5 773 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 1810049J17RikQ3V2G9 153 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Brsk2Q69Z98 735 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Hmgb4Q6P8W9 181 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Magea3Q6T340 320 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tubgcp5Q8BKN5 1024 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Vmn1r64Q8R2B8 320 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Pacsin3Q99JB8 424 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Mtmr1Q9Z2C4 669 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Sptlc1O35704 473 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Fen1P39749 378 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Shmt1P50431 478 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Thumpd3P97770 505 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Clec4gQ8BNX1 294 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Taf1dQ9D4V4 322 aa16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tmx2Q9D710 295 aaKnown RBP16.95■□□□□ 0.3
Trim28-201ENSMUST00000005705 C130060K24RikG3UWA8 416 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tlk2O55047 718 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Fgfr2P21803 821 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Uchl4P58321 233 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Samhd1Q60710 627 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 PolnQ7TQ07 864 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Rimbp2Q80U40 1072 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Pggt1bQ8BUY9 377 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Dnali1Q8BVN8 258 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Arfip2Q8K221 341 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Adgrf4Q9D2L6 698 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Limd1Q9QXD8 668 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Atp6v1c1Q9Z1G3 382 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ccdc8D3YZV8 685 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Serpina3iD3Z450 408 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Nek2O35942 443 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 E2f6O54917 272 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 BtkP35991 659 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Clcn3P51791 818 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Stx2Q00262 289 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Gsdmc4Q3TR54 480 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Supt20hQ7TT00 530 aaKnown RBP16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Q80ZQ3 298 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Olfml3Q8BK62 406 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tyw3Q8BSA9 257 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Map1sQ8C052 973 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 AslQ91YI0 464 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Hars2Q99KK9 505 aa16.94■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms