RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	VMA22	P38784	181 aa		5.98	□□□□□ -1.45
TGA1	tA(UGC)A	RAV2	Q03956	351 aa		5.98	□□□□□ -1.45
TGA1	tA(UGC)A	SDO1	Q07953	250 aa	Known RBP	5.98	□□□□□ -1.45
TGA1	tA(UGC)A	RPL2A	P0CX45	254 aa	Known RBP	5.97	□□□□□ -1.45
TGA1	tA(UGC)A	RPL2B	P0CX46	254 aa	Known RBP	5.97	□□□□□ -1.45
TGA1	tA(UGC)A	RPS11A	P0CX47	156 aa	Known RBP	5.97	□□□□□ -1.45
TGA1	tA(UGC)A	RPS11B	P0CX48	156 aa	Known RBP	5.97	□□□□□ -1.45
TGA1	tA(UGC)A	RNA15	P25299	296 aa	Predicted RBP	5.97	□□□□□ -1.45
TGA1	tA(UGC)A	ERV2	Q12284	196 aa		5.97	□□□□□ -1.45
TGA1	tA(UGC)A	MRPL20	P22354	195 aa	Predicted RBP	5.96	□□□□□ -1.46
TGA1	tA(UGC)A	YHR173C	P38864	112 aa		5.96	□□□□□ -1.46
TGA1	tA(UGC)A	YJR096W	P47137	282 aa		5.96	□□□□□ -1.46
TGA1	tA(UGC)A	PAU4	P53427	120 aa		5.96	□□□□□ -1.46
TGA1	tA(UGC)A	TOM7	P53507	60 aa		5.96	□□□□□ -1.46
TGA1	tA(UGC)A	TMA23	Q03525	211 aa		5.96	□□□□□ -1.46
TGA1	tA(UGC)A	PLP1	Q04004	230 aa		5.96	□□□□□ -1.46
TGA1	tA(UGC)A	VAM10	Q08474	114 aa		5.96	□□□□□ -1.46
TGA1	tA(UGC)A	YBR298C-A	Q8TGK4	73 aa		5.96	□□□□□ -1.46
TGA1	tA(UGC)A	HTB2	P02294	131 aa		5.95	□□□□□ -1.46
TGA1	tA(UGC)A	ECM25	P32525	599 aa		5.95	□□□□□ -1.46
TGA1	tA(UGC)A	NNK1	P36003	928 aa		5.95	□□□□□ -1.46
TGA1	tA(UGC)A	RPL14A	P36105	138 aa	Known RBP	5.95	□□□□□ -1.46
TGA1	tA(UGC)A	RPL14B	P38754	138 aa	Known RBP	5.95	□□□□□ -1.46
TGA1	tA(UGC)A	YMR141C	P40211	102 aa		5.95	□□□□□ -1.46
TGA1	tA(UGC)A	SNX4	P47057	423 aa		5.95	□□□□□ -1.46
TGA1	tA(UGC)A	MCM22	P47167	239 aa		5.95	□□□□□ -1.46
TGA1	tA(UGC)A	YOL085C	Q99345	113 aa		5.95	□□□□□ -1.46
TGA1	tA(UGC)A	VAR1	P02381	398 aa		5.94	□□□□□ -1.46
TGA1	tA(UGC)A	SHG1	P38337	142 aa		5.94	□□□□□ -1.46
TGA1	tA(UGC)A	HUA1	P40325	198 aa		5.94	□□□□□ -1.46
TGA1	tA(UGC)A	VHS2	P40463	436 aa		5.94	□□□□□ -1.46
TGA1	tA(UGC)A	AFR1	P33304	620 aa		5.93	□□□□□ -1.46
TGA1	tA(UGC)A	FMP41	P53889	259 aa	Known RBP	5.93	□□□□□ -1.46
TGA1	tA(UGC)A	SME1	Q12330	94 aa	Predicted RBP	5.93	□□□□□ -1.46
TGA1	tA(UGC)A	PAU1	P0CE88	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	PAU14	P0CE89	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	PAU6	P0CE90	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	PAU18	P0CE91	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	PAU8	P0CE92	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	PAU11	P0CE93	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	CPT1	P17898	393 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	PAU13	P38725	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	PAU10	Q03050	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	PAU20	Q08322	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	FMP16	Q12497	93 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	PAU9	Q3E770	120 aa		5.92	□□□□□ -1.46
TGA1	tA(UGC)A	YBR085C-A	O43137	85 aa		5.91	□□□□□ -1.46
TGA1	tA(UGC)A	VMA16	P23968	213 aa		5.91	□□□□□ -1.46
TGA1	tA(UGC)A	AME1	P38313	324 aa		5.91	□□□□□ -1.46
TGA1	tA(UGC)A	UBC12	P52491	188 aa		5.91	□□□□□ -1.46
TGA1	tA(UGC)A	YDR215C	Q12240	137 aa		5.91	□□□□□ -1.46
TGA1	tA(UGC)A	ATP14	Q12349	124 aa		5.91	□□□□□ -1.46
TGA1	tA(UGC)A	RPS22A	P0C0W1	130 aa	Known RBP	5.9	□□□□□ -1.46
TGA1	tA(UGC)A	TY1A-H	P0C2I4	478 aa	Known RBP	5.9	□□□□□ -1.46
TGA1	tA(UGC)A	YCR001W	P25347	104 aa		5.9	□□□□□ -1.46
TGA1	tA(UGC)A	HMX1	P32339	317 aa		5.9	□□□□□ -1.46
TGA1	tA(UGC)A	MRPL4	P36517	319 aa		5.9	□□□□□ -1.46
TGA1	tA(UGC)A	HAL1	Q01766	294 aa		5.9	□□□□□ -1.46
TGA1	tA(UGC)A	SGF11	Q03067	99 aa		5.9	□□□□□ -1.46
TGA1	tA(UGC)A	COA4	Q05809	96 aa		5.9	□□□□□ -1.46
TGA1	tA(UGC)A	YLR342W-A	Q3E810	57 aa		5.9	□□□□□ -1.46
TGA1	tA(UGC)A	RPP1A	P05318	106 aa	Predicted RBP	5.89	□□□□□ -1.47
TGA1	tA(UGC)A	MSK1	P32048	576 aa		5.89	□□□□□ -1.47
TGA1	tA(UGC)A	CYB5	P40312	120 aa		5.89	□□□□□ -1.47
TGA1	tA(UGC)A	YIL163C	P40448	117 aa		5.89	□□□□□ -1.47
TGA1	tA(UGC)A	VMA9	Q3E7B6	73 aa		5.89	□□□□□ -1.47
TGA1	tA(UGC)A	RPL31B	P0C2H9	113 aa	Known RBP	5.88	□□□□□ -1.47
TGA1	tA(UGC)A	SNN1	P48232	102 aa		5.88	□□□□□ -1.47
TGA1	tA(UGC)A	YGL185C	P53100	379 aa		5.88	□□□□□ -1.47
TGA1	tA(UGC)A	ATP19	P81451	68 aa		5.88	□□□□□ -1.47
TGA1	tA(UGC)A	YLR302C	O13544	120 aa		5.87	□□□□□ -1.47
TGA1	tA(UGC)A	SRP21	P32342	167 aa		5.87	□□□□□ -1.47
TGA1	tA(UGC)A	YPT10	P38146	199 aa		5.87	□□□□□ -1.47
TGA1	tA(UGC)A	YBR090C	P38253	122 aa		5.87	□□□□□ -1.47
TGA1	tA(UGC)A	SNO1	Q03144	224 aa		5.87	□□□□□ -1.47
TGA1	tA(UGC)A	YMR253C	Q04835	414 aa		5.87	□□□□□ -1.47
TGA1	tA(UGC)A	UTP23	Q12339	254 aa	Known RBP	5.87	□□□□□ -1.47
TGA1	tA(UGC)A	Q0142	Q9ZZW4	58 aa		5.87	□□□□□ -1.47
TGA1	tA(UGC)A	YPS5	P53057	165 aa		5.86	□□□□□ -1.47
TGA1	tA(UGC)A	BRP1	P53194	125 aa		5.86	□□□□□ -1.47
TGA1	tA(UGC)A	DAD4	P69851	72 aa		5.86	□□□□□ -1.47
TGA1	tA(UGC)A	TIR1	P10863	254 aa		5.85	□□□□□ -1.47
TGA1	tA(UGC)A	SRP14	P38985	146 aa		5.85	□□□□□ -1.47
TGA1	tA(UGC)A	VMA7	P39111	118 aa		5.85	□□□□□ -1.47
TGA1	tA(UGC)A	RRT13	P40042	185 aa		5.85	□□□□□ -1.47
TGA1	tA(UGC)A	PHS1	P40857	217 aa		5.85	□□□□□ -1.47
TGA1	tA(UGC)A	RPL16B	P26785	198 aa	Known RBP	5.84	□□□□□ -1.47
TGA1	tA(UGC)A	AGA1	P32323	725 aa		5.84	□□□□□ -1.47
TGA1	tA(UGC)A	FZF1	P32805	299 aa		5.84	□□□□□ -1.47
TGA1	tA(UGC)A	RIB5	P38145	238 aa		5.84	□□□□□ -1.47
TGA1	tA(UGC)A	RPR2	P40571	144 aa		5.84	□□□□□ -1.47
TGA1	tA(UGC)A	YDR366C	P87287	132 aa		5.84	□□□□□ -1.47
TGA1	tA(UGC)A	DAD1	Q12248	94 aa		5.84	□□□□□ -1.47
TGA1	tA(UGC)A	TMA17	Q12513	150 aa		5.84	□□□□□ -1.47
TGA1	tA(UGC)A	YBR200W-A	Q3E755	54 aa		5.84	□□□□□ -1.47
TGA1	tA(UGC)A	COQ3	P27680	312 aa		5.83	□□□□□ -1.48
TGA1	tA(UGC)A	ELF1	P36053	145 aa		5.83	□□□□□ -1.48
TGA1	tA(UGC)A	PGD1	P40356	397 aa		5.83	□□□□□ -1.48
TGA1	tA(UGC)A	YCH1	P42937	148 aa		5.83	□□□□□ -1.48
TGA1	tA(UGC)A	COX16	P47081	118 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 119.1 ms