RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W TMA20P89886 181 aaPredicted RBP3.47□□□□□ -1.85
SSO1YPL232W YMR253CQ04835 414 aa3.47□□□□□ -1.85
SSO1YPL232W NKP1Q12493 238 aa3.47□□□□□ -1.85
SSO1YPL232W COQ3P27680 312 aa3.46□□□□□ -1.86
SSO1YPL232W AGA1P32323 725 aa3.46□□□□□ -1.86
SSO1YPL232W NPL6P32832 435 aa3.46□□□□□ -1.86
SSO1YPL232W KRE9P39005 276 aa3.46□□□□□ -1.86
SSO1YPL232W RRT13P40042 185 aa3.46□□□□□ -1.86
SSO1YPL232W RPL13BP40212 199 aaKnown RBP3.46□□□□□ -1.86
SSO1YPL232W YGR269WP40326 108 aa3.46□□□□□ -1.86
SSO1YPL232W SHH3Q04487 196 aa3.46□□□□□ -1.86
SSO1YPL232W TRM13Q12383 476 aa3.46□□□□□ -1.86
SSO1YPL232W RPL13AQ12690 199 aaPredicted RBP3.46□□□□□ -1.86
SSO1YPL232W ARG80P07249 177 aa3.45□□□□□ -1.86
SSO1YPL232W RPB3P16370 318 aaKnown RBP3.45□□□□□ -1.86
SSO1YPL232W SLM6P38343 150 aa3.45□□□□□ -1.86
SSO1YPL232W YCH1P42937 148 aa3.45□□□□□ -1.86
SSO1YPL232W SER2P42941 309 aa3.45□□□□□ -1.86
SSO1YPL232W LSM7P53905 115 aaKnown RBP3.45□□□□□ -1.86
SSO1YPL232W DPP1Q05521 289 aa3.45□□□□□ -1.86
SSO1YPL232W RDI1Q12434 202 aa3.45□□□□□ -1.86
SSO1YPL232W RPL33AP05744 107 aaKnown RBP3.44□□□□□ -1.86
SSO1YPL232W PUT1P09368 476 aa3.44□□□□□ -1.86
SSO1YPL232W YPC1P38298 316 aa3.44□□□□□ -1.86
SSO1YPL232W RPL33BP41056 107 aaKnown RBP3.44□□□□□ -1.86
SSO1YPL232W CWC23P52868 283 aaPredicted RBP3.44□□□□□ -1.86
SSO1YPL232W TPN1P53099 579 aa3.44□□□□□ -1.86
SSO1YPL232W ERP1Q05359 219 aaKnown RBP3.44□□□□□ -1.86
SSO1YPL232W ARR3Q06598 404 aa3.44□□□□□ -1.86
SSO1YPL232W Q0255P03881 472 aa3.43□□□□□ -1.86
SSO1YPL232W CPT1P17898 393 aa3.43□□□□□ -1.86
SSO1YPL232W IES5P40060 125 aa3.43□□□□□ -1.86
SSO1YPL232W YNL217WP40152 326 aa3.43□□□□□ -1.86
SSO1YPL232W GPG1P53130 126 aa3.43□□□□□ -1.86
SSO1YPL232W YGR017WP53210 297 aa3.43□□□□□ -1.86
SSO1YPL232W GPI15P53961 229 aa3.43□□□□□ -1.86
SSO1YPL232W YLR042CQ07990 161 aa3.43□□□□□ -1.86
SSO1YPL232W TFB5Q3E7C1 72 aaPredicted RBP3.43□□□□□ -1.86
SSO1YPL232W RRT15Q3E811 62 aa3.43□□□□□ -1.86
SSO1YPL232W YHR213W-AQ8TGT4 77 aa3.43□□□□□ -1.86
SSO1YPL232W NHP6BP11633 99 aaKnown RBP3.42□□□□□ -1.86
SSO1YPL232W MRPL20P22354 195 aaPredicted RBP3.42□□□□□ -1.86
SSO1YPL232W EMC5P40540 141 aa3.42□□□□□ -1.86
SSO1YPL232W BRP1P53194 125 aa3.42□□□□□ -1.86
SSO1YPL232W YDR366CP87287 132 aa3.42□□□□□ -1.86
SSO1YPL232W YMR082CQ04276 118 aa3.42□□□□□ -1.86
SSO1YPL232W CTR3Q06686 241 aa3.42□□□□□ -1.86
SSO1YPL232W ATX2Q12067 313 aa3.42□□□□□ -1.86
SSO1YPL232W PRR2Q12310 699 aa3.42□□□□□ -1.86
SSO1YPL232W RPL16BP26785 198 aaKnown RBP3.41□□□□□ -1.86
SSO1YPL232W MRPL28P36527 147 aa3.41□□□□□ -1.86
SSO1YPL232W IPI1P38803 334 aaPredicted RBP3.41□□□□□ -1.86
SSO1YPL232W TIM44Q01852 431 aa3.41□□□□□ -1.86
SSO1YPL232W LCL1Q02786 101 aa3.41□□□□□ -1.86
SSO1YPL232W MRX11Q03079 207 aa3.41□□□□□ -1.86
SSO1YPL232W YDR115WQ04598 105 aa3.41□□□□□ -1.86
SSO1YPL232W YLR307C-AQ3E825 87 aa3.41□□□□□ -1.86
SSO1YPL232W YDR157WA0A023PZE8 133 aa3.4□□□□□ -1.87
SSO1YPL232W DIF1O13577 133 aa3.4□□□□□ -1.87
SSO1YPL232W GCN3P14741 305 aa3.4□□□□□ -1.87
SSO1YPL232W SPT14P32363 452 aa3.4□□□□□ -1.87
SSO1YPL232W KTI12P34253 313 aaKnown RBP3.4□□□□□ -1.87
SSO1YPL232W DER1P38307 211 aa3.4□□□□□ -1.87
SSO1YPL232W SVP26P38869 228 aa3.4□□□□□ -1.87
SSO1YPL232W YMR007WQ03675 126 aa3.4□□□□□ -1.87
SSO1YPL232W ORM2Q06144 216 aa3.4□□□□□ -1.87
SSO1YPL232W YLR179CQ06252 201 aaKnown RBP3.4□□□□□ -1.87
SSO1YPL232W FIT2Q08906 153 aa3.4□□□□□ -1.87
SSO1YPL232W YBL059WP34224 193 aa3.39□□□□□ -1.87
SSO1YPL232W YEA6P39953 335 aa3.39□□□□□ -1.87
SSO1YPL232W KEG1P43614 200 aa3.39□□□□□ -1.87
SSO1YPL232W AIM34Q03673 198 aa3.39□□□□□ -1.87
SSO1YPL232W YDL242WQ07746 117 aa3.39□□□□□ -1.87
SSO1YPL232W RRT7Q07829 113 aa3.39□□□□□ -1.87
SSO1YPL232W YLR125WQ12138 136 aa3.39□□□□□ -1.87
SSO1YPL232W IES3Q12345 250 aa3.39□□□□□ -1.87
SSO1YPL232W ISN1Q99312 450 aa3.39□□□□□ -1.87
SSO1YPL232W HTB2P02294 131 aa3.38□□□□□ -1.87
SSO1YPL232W MRS1P07266 363 aa3.38□□□□□ -1.87
SSO1YPL232W HSP12P22943 109 aaKnown RBP3.38□□□□□ -1.87
SSO1YPL232W YPT53P36019 220 aa3.38□□□□□ -1.87
SSO1YPL232W YBR013CP38215 129 aa3.38□□□□□ -1.87
SSO1YPL232W MGA1P53050 456 aa3.38□□□□□ -1.87
SSO1YPL232W ERI1P62651 68 aaKnown RBP3.38□□□□□ -1.87
SSO1YPL232W FCF1Q05498 189 aaPredicted RBP3.38□□□□□ -1.87
SSO1YPL232W YBR200W-AQ3E755 54 aa3.38□□□□□ -1.87
SSO1YPL232W SPS2P08459 502 aa3.37□□□□□ -1.87
SSO1YPL232W QCR9P22289 66 aa3.37□□□□□ -1.87
SSO1YPL232W RAI1P53063 387 aaKnown RBP3.37□□□□□ -1.87
SSO1YPL232W MMS2P53152 137 aa3.37□□□□□ -1.87
SSO1YPL232W BET5Q03630 159 aa3.37□□□□□ -1.87
SSO1YPL232W YPR010C-AA5Z2X5 72 aa3.36□□□□□ -1.87
SSO1YPL232W YAR023CD6VPM8 179 aa3.36□□□□□ -1.87
SSO1YPL232W YCR023CP25351 611 aa3.36□□□□□ -1.87
SSO1YPL232W RPS2P25443 254 aaKnown RBP3.36□□□□□ -1.87
SSO1YPL232W TIP1P27654 210 aaPredicted RBP3.36□□□□□ -1.87
SSO1YPL232W YMR141CP40211 102 aa3.36□□□□□ -1.87
SSO1YPL232W SDO1Q07953 250 aaKnown RBP3.36□□□□□ -1.87
SSO1YPL232W DGA1Q08650 418 aa3.36□□□□□ -1.87
SSO1YPL232W YDR010CQ12426 110 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms