RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C GET2P40056 285 aa8.01□□□□□ -1.13
SSN3YPL042C HUT1Q12520 339 aa8.01□□□□□ -1.13
SSN3YPL042C CDC39P25655 2108 aaKnown RBP8□□□□□ -1.13
SSN3YPL042C YER084WP40057 128 aa8□□□□□ -1.13
SSN3YPL042C YPL073CP40323 161 aa8□□□□□ -1.13
SSN3YPL042C ASM4Q05166 528 aa8□□□□□ -1.13
SSN3YPL042C FCF1Q05498 189 aaPredicted RBP8□□□□□ -1.13
SSN3YPL042C NAT3Q06504 195 aa8□□□□□ -1.13
SSN3YPL042C YOR385WQ08909 290 aa8□□□□□ -1.13
SSN3YPL042C YLR412C-AQ3E742 68 aa8□□□□□ -1.13
SSN3YPL042C HEM4P06174 275 aa7.99□□□□□ -1.13
SSN3YPL042C COX10P21592 462 aa7.99□□□□□ -1.13
SSN3YPL042C LSM2P38203 95 aaKnown RBP7.99□□□□□ -1.13
SSN3YPL042C ATG5Q12380 294 aa7.99□□□□□ -1.13
SSN3YPL042C YBL112CQ3E7Y4 105 aa7.99□□□□□ -1.13
SSN3YPL042C YBR056W-AI2HB52 66 aa7.98□□□□□ -1.13
SSN3YPL042C YPR170W-BP0C5R9 85 aa7.98□□□□□ -1.13
SSN3YPL042C RPS2P25443 254 aaKnown RBP7.98□□□□□ -1.13
SSN3YPL042C MBB1P39534 108 aa7.98□□□□□ -1.13
SSN3YPL042C CAB4P53332 305 aa7.98□□□□□ -1.13
SSN3YPL042C SME1Q12330 94 aaPredicted RBP7.98□□□□□ -1.13
SSN3YPL042C MRPL27P36526 146 aaPredicted RBP7.98□□□□□ -1.13
SSN3YPL042C ARC40P38328 384 aaKnown RBP7.98□□□□□ -1.13
SSN3YPL042C YDL009CQ12210 107 aa7.98□□□□□ -1.13
SSN3YPL042C TIP1P27654 210 aaPredicted RBP7.97□□□□□ -1.13
SSN3YPL042C PTI1P39927 425 aaPredicted RBP7.97□□□□□ -1.13
SSN3YPL042C YCK3P39962 524 aa7.97□□□□□ -1.13
SSN3YPL042C YND1P40009 630 aa7.97□□□□□ -1.13
SSN3YPL042C YIA6P40556 373 aa7.97□□□□□ -1.13
SSN3YPL042C TOS8P53147 276 aa7.97□□□□□ -1.13
SSN3YPL042C ATP23P53722 227 aa7.97□□□□□ -1.13
SSN3YPL042C SCW10Q04951 389 aa7.97□□□□□ -1.13
SSN3YPL042C FIT3Q08907 204 aa7.97□□□□□ -1.13
SSN3YPL042C PRP8P33334 2413 aaKnown RBP7.96□□□□□ -1.13
SSN3YPL042C MDM10P18409 493 aa7.96□□□□□ -1.13
SSN3YPL042C GON7P46984 123 aa7.96□□□□□ -1.13
SSN3YPL042C SIP18P50263 79 aa7.96□□□□□ -1.13
SSN3YPL042C ERG25P53045 309 aa7.96□□□□□ -1.13
SSN3YPL042C UPS1Q05776 175 aa7.96□□□□□ -1.13
SSN3YPL042C YPR098CQ06089 161 aa7.96□□□□□ -1.13
SSN3YPL042C SHH4Q06236 168 aa7.96□□□□□ -1.13
SSN3YPL042C SEC4P07560 215 aaKnown RBP7.95□□□□□ -1.14
SSN3YPL042C TEM1P38987 245 aa7.95□□□□□ -1.14
SSN3YPL042C YIL059CP40520 121 aa7.95□□□□□ -1.14
SSN3YPL042C TTI2P47168 421 aa7.95□□□□□ -1.14
SSN3YPL042C YPS3Q12303 508 aa7.95□□□□□ -1.14
SSN3YPL042C ADH1P00330 348 aaKnown RBP7.95□□□□□ -1.14
SSN3YPL042C MRPL20P22354 195 aaPredicted RBP7.95□□□□□ -1.14
SSN3YPL042C MST27P53176 234 aa7.95□□□□□ -1.14
SSN3YPL042C API2Q04413 109 aa7.95□□□□□ -1.14
SSN3YPL042C ERS1P17261 260 aa7.94□□□□□ -1.14
SSN3YPL042C MAK32P23060 363 aa7.94□□□□□ -1.14
SSN3YPL042C MRP17P28778 131 aa7.94□□□□□ -1.14
SSN3YPL042C RPL32P38061 130 aaKnown RBP7.94□□□□□ -1.14
SSN3YPL042C FLX1P40464 311 aa7.94□□□□□ -1.14
SSN3YPL042C YIL024CP40543 189 aa7.94□□□□□ -1.14
SSN3YPL042C OST1P41543 476 aaKnown RBP7.94□□□□□ -1.14
SSN3YPL042C FMP41P53889 259 aaKnown RBP7.94□□□□□ -1.14
SSN3YPL042C HMRA1P0CY11 126 aa7.93□□□□□ -1.14
SSN3YPL042C AGA2P32781 87 aa7.93□□□□□ -1.14
SSN3YPL042C SDH4P37298 181 aa7.93□□□□□ -1.14
SSN3YPL042C SYM1Q06563 197 aa7.93□□□□□ -1.14
SSN3YPL042C NCE102Q12207 173 aaRIP-Chip data7.93□□□□□ -1.14not detected
SSN3YPL042C MSI1P13712 422 aa7.92□□□□□ -1.14
SSN3YPL042C GLC7P32598 312 aaKnown RBP7.92□□□□□ -1.14
SSN3YPL042C CLB6P32943 380 aa7.92□□□□□ -1.14
SSN3YPL042C LAG1P38703 411 aa7.92□□□□□ -1.14
SSN3YPL042C MST28P39552 234 aa7.92□□□□□ -1.14
SSN3YPL042C BET5Q03630 159 aa7.92□□□□□ -1.14
SSN3YPL042C CUE4Q04201 117 aaPredicted RBP7.92□□□□□ -1.14
SSN3YPL042C YOR186WQ08560 144 aa7.92□□□□□ -1.14
SSN3YPL042C YKL102CP34249 101 aa7.91□□□□□ -1.14
SSN3YPL042C YHL037CP38733 133 aa7.91□□□□□ -1.14
SSN3YPL042C YHR140WP38842 239 aa7.91□□□□□ -1.14
SSN3YPL042C YFL051CP43552 160 aa7.91□□□□□ -1.14
SSN3YPL042C YBR255C-AQ3E776 120 aa7.91□□□□□ -1.14
SSN3YPL042C CKS1P20486 150 aaKnown RBP7.9□□□□□ -1.14
SSN3YPL042C PRM5P40476 318 aa7.9□□□□□ -1.14
SSN3YPL042C UBP8P50102 471 aa7.9□□□□□ -1.14
SSN3YPL042C ALG9P53868 555 aaKnown RBP7.9□□□□□ -1.14
SSN3YPL042C PCC1Q3E833 88 aa7.9□□□□□ -1.14
SSN3YPL042C YOS1Q3E834 85 aa7.9□□□□□ -1.14
SSN3YPL042C COA6Q3E846 104 aa7.9□□□□□ -1.14
SSN3YPL042C POP8P38208 133 aa7.89□□□□□ -1.15
SSN3YPL042C RPB11P38902 120 aa7.89□□□□□ -1.15
SSN3YPL042C UBC13P52490 153 aa7.89□□□□□ -1.15
SSN3YPL042C PIN3Q06449 215 aa7.89□□□□□ -1.15
SSN3YPL042C DGA1Q08650 418 aa7.89□□□□□ -1.15
SSN3YPL042C PAI3P01094 68 aa7.89□□□□□ -1.15
SSN3YPL042C TOM40P23644 387 aaKnown RBP7.89□□□□□ -1.15
SSN3YPL042C YFR045WP43617 309 aa7.89□□□□□ -1.15
SSN3YPL042C YMR103CQ04436 120 aa7.89□□□□□ -1.15
SSN3YPL042C RAD6P06104 172 aa7.88□□□□□ -1.15
SSN3YPL042C SRP21P32342 167 aa7.88□□□□□ -1.15
SSN3YPL042C YBL081WP38180 368 aaKnown RBP7.88□□□□□ -1.15
SSN3YPL042C CSH1P38287 376 aa7.88□□□□□ -1.15
SSN3YPL042C ARP3P47117 449 aaKnown RBP7.88□□□□□ -1.15
SSN3YPL042C YLR224WQ05947 369 aa7.88□□□□□ -1.15
SSN3YPL042C EAF3Q12432 401 aa7.88□□□□□ -1.15
SSN3YPL042C MEC1P38111 2368 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms