RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W SED1Q01589 338 aa0.49□□□□□ -2.33
RRI2YOL117W MGR2Q02889 113 aa0.49□□□□□ -2.33
RRI2YOL117W FMN1Q03778 218 aa0.49□□□□□ -2.33
RRI2YOL117W YLR053CQ12026 108 aa0.49□□□□□ -2.33
RRI2YOL117W RCF2P53721 224 aa0.48□□□□□ -2.33
RRI2YOL117W RPS22AP0C0W1 130 aaKnown RBP0.48□□□□□ -2.33
RRI2YOL117W RPL30P14120 105 aaKnown RBP0.48□□□□□ -2.33
RRI2YOL117W RFU1Q08003 200 aa0.48□□□□□ -2.33
RRI2YOL117W RPS22BQ3E7Y3 130 aaKnown RBP0.48□□□□□ -2.33
RRI2YOL117W HYP2P23301 157 aaKnown RBP0.47□□□□□ -2.33
RRI2YOL117W VPS51P36116 164 aa0.47□□□□□ -2.33
RRI2YOL117W HAP2P06774 265 aa0.46□□□□□ -2.34
RRI2YOL117W YMR141CP40211 102 aa0.46□□□□□ -2.34
RRI2YOL117W YPR202WQ08993 238 aa0.46□□□□□ -2.34
RRI2YOL117W LAA1P39526 2014 aa0.46□□□□□ -2.34
RRI2YOL117W YOR072WQ08486 104 aa0.46□□□□□ -2.34
RRI2YOL117W PEX34P25584 144 aa0.45□□□□□ -2.34
RRI2YOL117W SLM6P38343 150 aa0.45□□□□□ -2.34
RRI2YOL117W YER181CP40097 107 aa0.45□□□□□ -2.34
RRI2YOL117W APQ12P40532 138 aa0.45□□□□□ -2.34
RRI2YOL117W GPI11Q06636 219 aa0.45□□□□□ -2.34
RRI2YOL117W CHD1P32657 1468 aa0.45□□□□□ -2.34
RRI2YOL117W RPL33AP05744 107 aaKnown RBP0.44□□□□□ -2.34
RRI2YOL117W SPA2P23201 1466 aaKnown RBP0.44□□□□□ -2.34
RRI2YOL117W DDR48P18899 430 aaKnown RBP0.44□□□□□ -2.34
RRI2YOL117W SCS22Q6Q595 175 aa0.44□□□□□ -2.34
RRI2YOL117W RPL43AP0CX25 92 aaKnown RBP0.43□□□□□ -2.34
RRI2YOL117W RPL43BP0CX26 92 aa0.43□□□□□ -2.34
RRI2YOL117W YHR140WP38842 239 aa0.43□□□□□ -2.34
RRI2YOL117W YGL193CP53097 103 aa0.43□□□□□ -2.34
RRI2YOL117W YLR307C-AQ3E825 87 aa0.43□□□□□ -2.34
RRI2YOL117W MHF1Q3E835 90 aa0.43□□□□□ -2.34
RRI2YOL117W YGL041W-AP0C5N3 154 aa0.42□□□□□ -2.34
RRI2YOL117W MRPL24P36525 258 aaPredicted RBP0.42□□□□□ -2.34
RRI2YOL117W YJL218WP40892 196 aaKnown RBP0.42□□□□□ -2.34
RRI2YOL117W UBR1P19812 1950 aa0.42□□□□□ -2.34
RRI2YOL117W PHO13P19881 312 aa0.42□□□□□ -2.34
RRI2YOL117W MAK3Q03503 176 aa0.42□□□□□ -2.34
RRI2YOL117W YPR153WQ06537 140 aa0.42□□□□□ -2.34
RRI2YOL117W YPD1Q07688 167 aa0.42□□□□□ -2.34
RRI2YOL117W EFG1Q3E705 233 aaKnown RBP0.42□□□□□ -2.34
RRI2YOL117W YGL014C-AP0C5N1 53 aa0.41□□□□□ -2.34
RRI2YOL117W GPI2P46961 280 aa0.41□□□□□ -2.34
RRI2YOL117W VMA10P48836 114 aaKnown RBP0.41□□□□□ -2.34
RRI2YOL117W NSL1Q12143 216 aa0.41□□□□□ -2.34
RRI2YOL117W CMC2Q3E7A4 109 aa0.41□□□□□ -2.34
RRI2YOL117W YCL001W-AP87012 153 aa0.4□□□□□ -2.34
RRI2YOL117W HSL1P34244 1518 aa0.4□□□□□ -2.35
RRI2YOL117W NHP6AP11632 93 aaKnown RBP0.4□□□□□ -2.35
RRI2YOL117W MVB12P42939 101 aa0.4□□□□□ -2.35
RRI2YOL117W YDR476CQ03362 224 aa0.4□□□□□ -2.35
RRI2YOL117W COX5BP00425 151 aa0.39□□□□□ -2.35
RRI2YOL117W YLR157W-EP0CF00 54 aa0.39□□□□□ -2.35
RRI2YOL117W AME1P38313 324 aa0.39□□□□□ -2.35
RRI2YOL117W EST3Q03096 181 aa0.39□□□□□ -2.35
RRI2YOL117W ATP19P81451 68 aa0.38□□□□□ -2.35
RRI2YOL117W RRT7Q07829 113 aa0.38□□□□□ -2.35
RRI2YOL117W QCR2P07257 368 aa0.38□□□□□ -2.35
RRI2YOL117W YMR122CQ03879 124 aa0.38□□□□□ -2.35
RRI2YOL117W URA2P07259 2214 aaKnown RBP0.38□□□□□ -2.35
RRI2YOL117W IRC21Q04772 201 aa0.37□□□□□ -2.35
RRI2YOL117W PBI2P0CT04 75 aaKnown RBP0.36□□□□□ -2.35
RRI2YOL117W SAC3P46674 1301 aa0.36□□□□□ -2.35
RRI2YOL117W DER1P38307 211 aa0.36□□□□□ -2.35
RRI2YOL117W YBR056W-AI2HB52 66 aa0.35□□□□□ -2.35
RRI2YOL117W RPS28BP0C0X0 67 aaKnown RBP0.34□□□□□ -2.35
RRI2YOL117W FYV5P25585 152 aa0.34□□□□□ -2.35
RRI2YOL117W BUB2P26448 306 aaPredicted RBP0.34□□□□□ -2.35
RRI2YOL117W YJL009WP47078 108 aa0.34□□□□□ -2.35
RRI2YOL117W YNL019CP53975 284 aa0.34□□□□□ -2.35
RRI2YOL117W RPS28AQ3E7X9 67 aaPredicted RBP0.34□□□□□ -2.35
RRI2YOL117W HUG1Q6Q5K6 68 aa0.34□□□□□ -2.35
RRI2YOL117W HSP12P22943 109 aaKnown RBP0.34□□□□□ -2.36
RRI2YOL117W YOR034C-AQ3E735 80 aa0.34□□□□□ -2.36
RRI2YOL117W LST8P41318 303 aa0.33□□□□□ -2.36
RRI2YOL117W RPL40AP0CH08 128 aaKnown RBP0.32□□□□□ -2.36
RRI2YOL117W RPL40BP0CH09 128 aaKnown RBP0.32□□□□□ -2.36
RRI2YOL117W RPS1BP23248 255 aaKnown RBP0.32□□□□□ -2.36
RRI2YOL117W YGR201CP42936 225 aa0.32□□□□□ -2.36
RRI2YOL117W COA4Q05809 96 aa0.32□□□□□ -2.36
RRI2YOL117W GSC2P40989 1895 aa0.32□□□□□ -2.36
RRI2YOL117W BLM10P43583 2143 aa0.32□□□□□ -2.36
RRI2YOL117W RME1P32338 300 aaKnown RBP0.32□□□□□ -2.36
RRI2YOL117W SRL3P36167 246 aa0.32□□□□□ -2.36
RRI2YOL117W NMT1P14743 455 aa0.31□□□□□ -2.36
RRI2YOL117W UTP11P34247 250 aaPredicted RBP0.31□□□□□ -2.36
RRI2YOL117W AIM4P38305 123 aaPredicted RBP0.31□□□□□ -2.36
RRI2YOL117W PHB1P40961 287 aa0.31□□□□□ -2.36
RRI2YOL117W YMR321CQ04898 105 aa0.31□□□□□ -2.36
RRI2YOL117W KTI11Q3E840 82 aa0.31□□□□□ -2.36
RRI2YOL117W COA6Q3E846 104 aa0.3□□□□□ -2.36
RRI2YOL117W EMC4P53073 190 aa0.3□□□□□ -2.36
RRI2YOL117W FIT3Q08907 204 aa0.3□□□□□ -2.36
RRI2YOL117W HUT1Q12520 339 aa0.3□□□□□ -2.36
RRI2YOL117W YHR213WP0CI67 198 aa0.29□□□□□ -2.36
RRI2YOL117W YBR013CP38215 129 aa0.29□□□□□ -2.36
RRI2YOL117W IPI1P38803 334 aaPredicted RBP0.29□□□□□ -2.36
RRI2YOL117W SOM1Q05676 74 aa0.29□□□□□ -2.36
RRI2YOL117W MIC27P50945 234 aa0.28□□□□□ -2.36
RRI2YOL117W FUN14P18411 198 aa0.28□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms