RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W PGD1P40356 397 aa11.3□□□□□ -0.6
SHR5YOL110W YIL163CP40448 117 aa11.3□□□□□ -0.6
SHR5YOL110W LRS4Q04087 347 aaKnown RBP11.3□□□□□ -0.6
SHR5YOL110W NTF2P33331 125 aaKnown RBP11.29□□□□□ -0.6
SHR5YOL110W HIT1P46973 164 aa11.29□□□□□ -0.6
SHR5YOL110W DAD3P69850 94 aa11.29□□□□□ -0.6
SHR5YOL110W RAV2Q03956 351 aa11.29□□□□□ -0.6
SHR5YOL110W CMC1P36064 111 aa11.28□□□□□ -0.6
SHR5YOL110W GPI2P46961 280 aa11.28□□□□□ -0.6
SHR5YOL110W AIM24P47127 394 aa11.28□□□□□ -0.6
SHR5YOL110W TOM7P53507 60 aa11.28□□□□□ -0.6
SHR5YOL110W LAS17Q12446 633 aa11.28□□□□□ -0.6
SHR5YOL110W YPR145C-AQ2V2P0 78 aa11.28□□□□□ -0.6
SHR5YOL110W YLR302CO13544 120 aa11.27□□□□□ -0.61
SHR5YOL110W ATG8P38182 117 aaRIP-Chip data11.27□□□□□ -0.61not detected
SHR5YOL110W VMA21P41806 77 aa11.27□□□□□ -0.61
SHR5YOL110W CAX4P53223 239 aa11.27□□□□□ -0.61
SHR5YOL110W IZH1Q03419 316 aa11.27□□□□□ -0.61
SHR5YOL110W RRG8Q06109 277 aa11.27□□□□□ -0.61
SHR5YOL110W ATG39Q06159 398 aa11.27□□□□□ -0.61
SHR5YOL110W NAT3Q06504 195 aa11.27□□□□□ -0.61
SHR5YOL110W YHR212W-AP0CX91 67 aa11.26□□□□□ -0.61
SHR5YOL110W MBB1P39534 108 aa11.26□□□□□ -0.61
SHR5YOL110W ZEO1Q08245 113 aa11.26□□□□□ -0.61
SHR5YOL110W TY1A-LR4P0C2I8 440 aaKnown RBP11.25□□□□□ -0.61
SHR5YOL110W TY1A-DR6P0CX70 440 aa11.25□□□□□ -0.61
SHR5YOL110W TY1A-ER1P0CX71 440 aa11.25□□□□□ -0.61
SHR5YOL110W TY1A-LR2P0CX72 440 aa11.25□□□□□ -0.61
SHR5YOL110W TY1A-PLP0CX73 440 aa11.25□□□□□ -0.61
SHR5YOL110W TY1A-JR1P0CX74 440 aa11.25□□□□□ -0.61
SHR5YOL110W TY1A-LR3P0CX75 440 aa11.25□□□□□ -0.61
SHR5YOL110W TY1A-ML2P0CX76 440 aa11.25□□□□□ -0.61
SHR5YOL110W RPB3P16370 318 aaKnown RBP11.25□□□□□ -0.61
SHR5YOL110W AGE2P40529 298 aa11.25□□□□□ -0.61
SHR5YOL110W TIM11P81449 96 aaPredicted RBP11.25□□□□□ -0.61
SHR5YOL110W YML108WQ03759 105 aa11.25□□□□□ -0.61
SHR5YOL110W TY1A-GR1Q12085 440 aa11.25□□□□□ -0.61
SHR5YOL110W YPR013CQ12145 317 aa11.25□□□□□ -0.61
SHR5YOL110W TY1A-PR3Q6Q5H1 440 aaKnown RBP11.25□□□□□ -0.61
SHR5YOL110W TY1A-OLQ92392 440 aaKnown RBP11.25□□□□□ -0.61
SHR5YOL110W FMP49A0A023PZB3 126 aa11.24□□□□□ -0.61
SHR5YOL110W HSP10P38910 106 aa11.24□□□□□ -0.61
SHR5YOL110W HUA1P40325 198 aa11.24□□□□□ -0.61
SHR5YOL110W HHO1P53551 258 aa11.24□□□□□ -0.61
SHR5YOL110W SMT3Q12306 101 aaKnown RBP11.24□□□□□ -0.61
SHR5YOL110W MRPL20P22354 195 aaPredicted RBP11.23□□□□□ -0.61
SHR5YOL110W MST28P39552 234 aa11.23□□□□□ -0.61
SHR5YOL110W MRPL49P40858 161 aaPredicted RBP11.23□□□□□ -0.61
SHR5YOL110W MOG1P47123 218 aa11.23□□□□□ -0.61
SHR5YOL110W MST27P53176 234 aa11.23□□□□□ -0.61
SHR5YOL110W YLR118CQ12354 227 aa11.23□□□□□ -0.61
SHR5YOL110W HTB2P02294 131 aa11.22□□□□□ -0.61
SHR5YOL110W MGA1P53050 456 aa11.22□□□□□ -0.61
SHR5YOL110W YOL160WQ08321 113 aa11.22□□□□□ -0.61
SHR5YOL110W GEP3Q08622 556 aa11.22□□□□□ -0.61
SHR5YOL110W DCN1Q12395 269 aa11.22□□□□□ -0.61
SHR5YOL110W DYN1P36022 4092 aa11.21□□□□□ -0.61
SHR5YOL110W MSN1P22148 382 aa11.21□□□□□ -0.61
SHR5YOL110W UTR5P32630 166 aa11.21□□□□□ -0.61
SHR5YOL110W YBR144CP34215 104 aa11.21□□□□□ -0.61
SHR5YOL110W PAU15P40585 124 aa11.21□□□□□ -0.61
SHR5YOL110W LCB3P47013 409 aa11.21□□□□□ -0.61
SHR5YOL110W ATP19P81451 68 aa11.21□□□□□ -0.61
SHR5YOL110W IZH3Q07959 543 aa11.21□□□□□ -0.61
SHR5YOL110W SRP21P32342 167 aa11.2□□□□□ -0.62
SHR5YOL110W YPT10P38146 199 aa11.2□□□□□ -0.62
SHR5YOL110W DAN1P47178 298 aa11.2□□□□□ -0.62
SHR5YOL110W RPL31BP0C2H9 113 aaKnown RBP11.19□□□□□ -0.62
SHR5YOL110W APS2Q00381 147 aa11.19□□□□□ -0.62
SHR5YOL110W STP4Q07351 490 aa11.19□□□□□ -0.62
SHR5YOL110W SNU23Q12368 194 aaPredicted RBP11.19□□□□□ -0.62
SHR5YOL110W NHP6AP11632 93 aaKnown RBP11.18□□□□□ -0.62
SHR5YOL110W SDH4P37298 181 aa11.18□□□□□ -0.62
SHR5YOL110W AME1P38313 324 aa11.18□□□□□ -0.62
SHR5YOL110W YOR105WQ08504 108 aa11.18□□□□□ -0.62
SHR5YOL110W PRE9P23638 258 aaKnown RBP11.17□□□□□ -0.62
SHR5YOL110W POF1P25576 258 aa11.17□□□□□ -0.62
SHR5YOL110W YBR090CP38253 122 aa11.17□□□□□ -0.62
SHR5YOL110W SRP14P38985 146 aa11.17□□□□□ -0.62
SHR5YOL110W TDA4P47153 279 aa11.17□□□□□ -0.62
SHR5YOL110W YOP1Q12402 180 aa11.17□□□□□ -0.62
SHR5YOL110W YOR011W-AQ3E807 68 aa11.17□□□□□ -0.62
SHR5YOL110W RTG1P32607 177 aa11.16□□□□□ -0.62
SHR5YOL110W NSE4P43124 402 aa11.16□□□□□ -0.62
SHR5YOL110W YDL183CP48569 320 aa11.16□□□□□ -0.62
SHR5YOL110W YGR025WP53216 100 aa11.16□□□□□ -0.62
SHR5YOL110W COX18P53239 316 aa11.16□□□□□ -0.62
SHR5YOL110W YIP3P53633 176 aa11.16□□□□□ -0.62
SHR5YOL110W FYV6P53913 173 aa11.16□□□□□ -0.62
SHR5YOL110W DAD1Q12248 94 aa11.16□□□□□ -0.62
SHR5YOL110W YGL010WP25338 174 aa11.15□□□□□ -0.62
SHR5YOL110W YMR141CP40211 102 aa11.15□□□□□ -0.62
SHR5YOL110W SIM1P40472 476 aa11.15□□□□□ -0.62
SHR5YOL110W YGL185CP53100 379 aa11.15□□□□□ -0.62
SHR5YOL110W DAD4P69851 72 aa11.15□□□□□ -0.62
SHR5YOL110W TRI1Q05024 226 aa11.15□□□□□ -0.62
SHR5YOL110W YPL162CQ12042 273 aa11.15□□□□□ -0.62
SHR5YOL110W PRM7Q12459 698 aa11.14□□□□□ -0.63
SHR5YOL110W TAR1Q8TGM6 124 aa11.14□□□□□ -0.63
SHR5YOL110W TIR1P10863 254 aa11.13□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms