RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W PCL1P24867 279 aa2.36□□□□□ -2.03
MSH2YOL090W GAL83Q04739 417 aa2.36□□□□□ -2.03
MSH2YOL090W YPR114WQ06107 315 aa2.36□□□□□ -2.03
MSH2YOL090W FSF1Q12029 327 aaKnown RBP2.36□□□□□ -2.03
MSH2YOL090W YCL001W-BQ96VH2 84 aa2.36□□□□□ -2.03
MSH2YOL090W YER039C-AP0CD97 72 aa2.35□□□□□ -2.03
MSH2YOL090W ETR1P38071 380 aa2.35□□□□□ -2.03
MSH2YOL090W YHR125WP38831 101 aa2.35□□□□□ -2.03
MSH2YOL090W SAE3P89114 91 aa2.35□□□□□ -2.03
MSH2YOL090W YEL009C-AA0A023PZF2 135 aa2.35□□□□□ -2.03
MSH2YOL090W COX4P04037 155 aa2.35□□□□□ -2.03
MSH2YOL090W VMA11P32842 164 aa2.35□□□□□ -2.03
MSH2YOL090W AIM2P39721 246 aa2.35□□□□□ -2.03
MSH2YOL090W YER134CP40081 178 aa2.35□□□□□ -2.03
MSH2YOL090W RPS12P48589 143 aaKnown RBP2.35□□□□□ -2.03
MSH2YOL090W YDR102CQ03864 110 aa2.35□□□□□ -2.03
MSH2YOL090W PPT2Q12036 173 aa2.35□□□□□ -2.03
MSH2YOL090W ODC2Q99297 307 aa2.35□□□□□ -2.03
MSH2YOL090W RAD10P06838 210 aa2.35□□□□□ -2.03
MSH2YOL090W MPC3P53311 146 aa2.35□□□□□ -2.03
MSH2YOL090W EST3Q03096 181 aa2.35□□□□□ -2.03
MSH2YOL090W TVP18Q04767 167 aa2.35□□□□□ -2.03
MSH2YOL090W ATP20Q12233 115 aa2.35□□□□□ -2.03
MSH2YOL090W IES3Q12345 250 aa2.35□□□□□ -2.03
MSH2YOL090W BOL1Q3E793 110 aa2.35□□□□□ -2.03
MSH2YOL090W HTD2P38790 280 aaKnown RBP2.34□□□□□ -2.03
MSH2YOL090W YEL028WP39989 153 aa2.34□□□□□ -2.03
MSH2YOL090W SMD1Q02260 146 aaPredicted RBP2.34□□□□□ -2.03
MSH2YOL090W YTH1Q06102 208 aaPredicted RBP2.34□□□□□ -2.03
MSH2YOL090W ANT1Q06497 328 aa2.34□□□□□ -2.03
MSH2YOL090W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
MSH2YOL090W YLR042CQ07990 161 aa2.34□□□□□ -2.03
MSH2YOL090W YMR253CQ04835 414 aa2.34□□□□□ -2.04
MSH2YOL090W ADH3P07246 375 aaKnown RBP2.33□□□□□ -2.04
MSH2YOL090W DDR48P18899 430 aaKnown RBP2.33□□□□□ -2.04
MSH2YOL090W AHT1P29589 182 aa2.33□□□□□ -2.04
MSH2YOL090W ECO1P43605 281 aa2.33□□□□□ -2.04
MSH2YOL090W YGR017WP53210 297 aa2.33□□□□□ -2.04
MSH2YOL090W AIM11P87275 137 aa2.33□□□□□ -2.04
MSH2YOL090W VPS28Q02767 242 aa2.33□□□□□ -2.04
MSH2YOL090W POR1P04840 283 aaKnown RBP2.33□□□□□ -2.04
MSH2YOL090W HIS3P06633 220 aa2.33□□□□□ -2.04
MSH2YOL090W YHR032W-AP0C5N6 59 aa2.33□□□□□ -2.04
MSH2YOL090W HSP12P22943 109 aaKnown RBP2.33□□□□□ -2.04
MSH2YOL090W MRS4P23500 304 aa2.33□□□□□ -2.04
MSH2YOL090W DAD3P69850 94 aa2.33□□□□□ -2.04
MSH2YOL090W RNH202Q05635 350 aa2.33□□□□□ -2.04
MSH2YOL090W SYM1Q06563 197 aa2.33□□□□□ -2.04
MSH2YOL090W YOR268CQ08734 132 aa2.33□□□□□ -2.04
MSH2YOL090W SPS2P08459 502 aa2.32□□□□□ -2.04
MSH2YOL090W GPA2P10823 449 aa2.32□□□□□ -2.04
MSH2YOL090W ARC15P40518 154 aaRIP-Chip data2.32□□□□□ -2.04not detected
MSH2YOL090W GVP36P40531 326 aaKnown RBP2.32□□□□□ -2.04
MSH2YOL090W PAC10P48363 199 aa2.32□□□□□ -2.04
MSH2YOL090W AIF1P52923 378 aa2.32□□□□□ -2.04
MSH2YOL090W VAR1P02381 398 aa2.32□□□□□ -2.04
MSH2YOL090W CBP6P07253 162 aaPredicted RBP2.32□□□□□ -2.04
MSH2YOL090W NSP1P14907 823 aaKnown RBP2.32□□□□□ -2.04
MSH2YOL090W GON7P46984 123 aa2.32□□□□□ -2.04
MSH2YOL090W SBH1P52870 82 aa2.32□□□□□ -2.04
MSH2YOL090W GEP7P53171 287 aa2.32□□□□□ -2.04
MSH2YOL090W MRPS16Q02608 121 aa2.32□□□□□ -2.04
MSH2YOL090W ZEO1Q08245 113 aa2.32□□□□□ -2.04
MSH2YOL090W YMR230W-AQ3E7B5 62 aa2.32□□□□□ -2.04
MSH2YOL090W YLR422WQ06409 1932 aa2.32□□□□□ -2.04
MSH2YOL090W CPA1P07258 411 aaKnown RBP2.31□□□□□ -2.04
MSH2YOL090W MID2P36027 376 aa2.31□□□□□ -2.04
MSH2YOL090W OCA6Q12454 224 aa2.31□□□□□ -2.04
MSH2YOL090W ECM34P38728 170 aa2.31□□□□□ -2.04
MSH2YOL090W YER135CP40082 130 aa2.31□□□□□ -2.04
MSH2YOL090W YER188WP40103 239 aa2.31□□□□□ -2.04
MSH2YOL090W RTR2Q12378 196 aa2.31□□□□□ -2.04
MSH2YOL090W HUT1Q12520 339 aa2.31□□□□□ -2.04
MSH2YOL090W YOR376W-AQ3E805 51 aa2.31□□□□□ -2.04
MSH2YOL090W NOP1P15646 327 aaKnown RBP2.31□□□□□ -2.04
MSH2YOL090W YOR062CP36025 268 aa2.31□□□□□ -2.04
MSH2YOL090W MPM1P40364 252 aa2.31□□□□□ -2.04
MSH2YOL090W MOB1P40484 314 aa2.31□□□□□ -2.04
MSH2YOL090W YFR045WP43617 309 aa2.31□□□□□ -2.04
MSH2YOL090W DSK2P48510 373 aa2.31□□□□□ -2.04
MSH2YOL090W RRT1P38192 103 aa2.3□□□□□ -2.04
MSH2YOL090W SPC25P40014 221 aa2.3□□□□□ -2.04
MSH2YOL090W GAT4P40569 121 aa2.3□□□□□ -2.04
MSH2YOL090W HAL1Q01766 294 aa2.3□□□□□ -2.04
MSH2YOL090W ELC1Q03071 99 aa2.3□□□□□ -2.04
MSH2YOL090W YMR252CQ04814 134 aa2.3□□□□□ -2.04
MSH2YOL090W UMP1P38293 148 aa2.3□□□□□ -2.04
MSH2YOL090W NSA2P40078 261 aaKnown RBP2.3□□□□□ -2.04
MSH2YOL090W RSM27P53305 110 aa2.3□□□□□ -2.04
MSH2YOL090W YML122CQ03207 126 aa2.3□□□□□ -2.04
MSH2YOL090W FCF2Q12035 217 aaPredicted RBP2.3□□□□□ -2.04
MSH2YOL090W YPR063CQ12160 140 aa2.3□□□□□ -2.04
MSH2YOL090W HAP2P06774 265 aa2.29□□□□□ -2.04
MSH2YOL090W YOL162WP0CF19 215 aa2.29□□□□□ -2.04
MSH2YOL090W RPB11P38902 120 aa2.29□□□□□ -2.04
MSH2YOL090W PHS1P40857 217 aa2.29□□□□□ -2.04
MSH2YOL090W DIE2P50076 525 aa2.29□□□□□ -2.04
MSH2YOL090W PIN3Q06449 215 aa2.29□□□□□ -2.04
MSH2YOL090W YPR117WQ06116 2489 aa2.29□□□□□ -2.04
MSH2YOL090W BAT2P47176 376 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 236 ms