RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W STF2P16965 84 aa1.69□□□□□ -2.14
SPO20YMR017W POG1P40473 351 aa1.69□□□□□ -2.14
SPO20YMR017W RPL37AP49166 88 aaKnown RBP1.69□□□□□ -2.14
SPO20YMR017W YLR460CP54007 376 aa1.69□□□□□ -2.14
SPO20YMR017W GAL83Q04739 417 aa1.69□□□□□ -2.14
SPO20YMR017W MAK31P23059 88 aa1.68□□□□□ -2.14
SPO20YMR017W SEC14P24280 304 aaKnown RBP1.68□□□□□ -2.14
SPO20YMR017W CLG1P35190 452 aa1.68□□□□□ -2.14
SPO20YMR017W RRT1P38192 103 aa1.68□□□□□ -2.14
SPO20YMR017W SEC72P39742 193 aaKnown RBP1.68□□□□□ -2.14
SPO20YMR017W RFC2P40348 353 aa1.68□□□□□ -2.14
SPO20YMR017W HPT1Q04178 221 aaKnown RBP1.68□□□□□ -2.14
SPO20YMR017W SMD2Q06217 110 aaKnown RBP1.68□□□□□ -2.14
SPO20YMR017W TRR1P29509 319 aaKnown RBP1.67□□□□□ -2.14
SPO20YMR017W HUA1P40325 198 aa1.67□□□□□ -2.14
SPO20YMR017W SEN2P16658 377 aa1.66□□□□□ -2.14
SPO20YMR017W MPM1P40364 252 aa1.66□□□□□ -2.14
SPO20YMR017W NSE4P43124 402 aa1.66□□□□□ -2.14
SPO20YMR017W UPS1Q05776 175 aa1.66□□□□□ -2.14
SPO20YMR017W ATG38Q05789 226 aaKnown RBP1.66□□□□□ -2.14
SPO20YMR017W DDP1Q99321 188 aaKnown RBP1.66□□□□□ -2.14
SPO20YMR017W RPL22AP05749 121 aaKnown RBP1.65□□□□□ -2.15
SPO20YMR017W MAK5P38112 773 aaPredicted RBP1.65□□□□□ -2.15
SPO20YMR017W MET31Q03081 177 aa1.65□□□□□ -2.15
SPO20YMR017W DML1Q03652 475 aa1.65□□□□□ -2.15
SPO20YMR017W HSP30P25619 332 aa1.64□□□□□ -2.15
SPO20YMR017W FYV4P38783 130 aaPredicted RBP1.64□□□□□ -2.15
SPO20YMR017W SOL1P50278 321 aa1.64□□□□□ -2.15
SPO20YMR017W YGL235WP53071 178 aa1.64□□□□□ -2.15
SPO20YMR017W JAC1P53193 184 aa1.64□□□□□ -2.15
SPO20YMR017W VPS28Q02767 242 aa1.64□□□□□ -2.15
SPO20YMR017W YHP1Q04116 353 aa1.64□□□□□ -2.15
SPO20YMR017W YDR391CQ04170 232 aa1.64□□□□□ -2.15
SPO20YMR017W CPR5P35176 225 aa1.63□□□□□ -2.15
SPO20YMR017W YPR127WQ06494 345 aa1.63□□□□□ -2.15
SPO20YMR017W ATG41Q12048 136 aa1.63□□□□□ -2.15
SPO20YMR017W TAR1Q8TGM6 124 aa1.63□□□□□ -2.15
SPO20YMR017W YLR422WQ06409 1932 aa1.63□□□□□ -2.15
SPO20YMR017W PHO13P19881 312 aa1.62□□□□□ -2.15
SPO20YMR017W YBL010CP32788 280 aa1.62□□□□□ -2.15
SPO20YMR017W EGD2P38879 174 aaKnown RBP1.62□□□□□ -2.15
SPO20YMR017W YNL200CP40165 246 aaKnown RBP1.62□□□□□ -2.15
SPO20YMR017W TTI2P47168 421 aa1.62□□□□□ -2.15
SPO20YMR017W YIP3P53633 176 aa1.62□□□□□ -2.15
SPO20YMR017W YKR005CQ02203 525 aa1.62□□□□□ -2.15
SPO20YMR017W GRX5Q02784 150 aa1.62□□□□□ -2.15
SPO20YMR017W YOR214CQ12282 236 aa1.62□□□□□ -2.15
SPO20YMR017W PEX11Q12462 236 aa1.62□□□□□ -2.15
SPO20YMR017W YOR381W-AQ3E804 55 aa1.62□□□□□ -2.15
SPO20YMR017W MRPL15P36523 253 aa1.61□□□□□ -2.15
SPO20YMR017W TIM8P57744 87 aa1.61□□□□□ -2.15
SPO20YMR017W ELP6Q04868 273 aa1.61□□□□□ -2.15
SPO20YMR017W YMR030W-AQ3E760 96 aa1.61□□□□□ -2.15
SPO20YMR017W UBR1P19812 1950 aa1.6□□□□□ -2.15
SPO20YMR017W UBC8P28263 218 aa1.6□□□□□ -2.15
SPO20YMR017W ETR1P38071 380 aa1.6□□□□□ -2.15
SPO20YMR017W SRP14P38985 146 aa1.6□□□□□ -2.15
SPO20YMR017W SBH2P52871 88 aa1.6□□□□□ -2.15
SPO20YMR017W RIM9Q04734 239 aa1.6□□□□□ -2.15
SPO20YMR017W RAD51P25454 400 aa1.59□□□□□ -2.15
SPO20YMR017W RME1P32338 300 aaKnown RBP1.59□□□□□ -2.15
SPO20YMR017W YBR242WP38331 238 aa1.59□□□□□ -2.15
SPO20YMR017W CCS1P40202 249 aaKnown RBP1.59□□□□□ -2.15
SPO20YMR017W TIM13P53299 105 aa1.59□□□□□ -2.15
SPO20YMR017W YMR321CQ04898 105 aa1.59□□□□□ -2.15
SPO20YMR017W YPR203WQ08994 102 aa1.58□□□□□ -2.16
SPO20YMR017W UBC6P33296 250 aaPredicted RBP1.57□□□□□ -2.16
SPO20YMR017W YRA2P36036 203 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SPO20YMR017W XPT1P47165 209 aa1.57□□□□□ -2.16
SPO20YMR017W YLR050CQ12155 161 aaKnown RBP1.57□□□□□ -2.16
SPO20YMR017W STT4P37297 1900 aa1.57□□□□□ -2.16
SPO20YMR017W SLH1P53327 1967 aaKnown RBP1.56□□□□□ -2.16
SPO20YMR017W RPL35AP0CX84 120 aaKnown RBP1.56□□□□□ -2.16
SPO20YMR017W RPL35BP0CX85 120 aaKnown RBP1.56□□□□□ -2.16
SPO20YMR017W AHT1P29589 182 aa1.56□□□□□ -2.16
SPO20YMR017W HHT1P61830 136 aa1.56□□□□□ -2.16
SPO20YMR017W YDR524C-BQ3E6R4 66 aa1.56□□□□□ -2.16
SPO20YMR017W RAD6P06104 172 aa1.55□□□□□ -2.16
SPO20YMR017W HAP2P06774 265 aa1.55□□□□□ -2.16
SPO20YMR017W RPL22BP56628 122 aaKnown RBP1.55□□□□□ -2.16
SPO20YMR017W PLP1Q04004 230 aa1.55□□□□□ -2.16
SPO20YMR017W YKL068W-AQ3E826 78 aa1.55□□□□□ -2.16
SPO20YMR017W QCR6P00127 147 aa1.54□□□□□ -2.16
SPO20YMR017W CMD1P06787 147 aaKnown RBP1.54□□□□□ -2.16
SPO20YMR017W NUF2P33895 451 aa1.54□□□□□ -2.16
SPO20YMR017W CSH1P38287 376 aa1.54□□□□□ -2.16
SPO20YMR017W GLR1P41921 483 aaKnown RBP1.54□□□□□ -2.16
SPO20YMR017W YDR278CQ05612 105 aa1.54□□□□□ -2.16
SPO20YMR017W YHL037CP38733 133 aa1.53□□□□□ -2.16
SPO20YMR017W YEL073CP39974 107 aa1.53□□□□□ -2.16
SPO20YMR017W MOB1P40484 314 aa1.53□□□□□ -2.16
SPO20YMR017W YFL051CP43552 160 aa1.53□□□□□ -2.16
SPO20YMR017W RPL37BP51402 88 aaKnown RBP1.53□□□□□ -2.16
SPO20YMR017W YNL140CP53910 189 aa1.53□□□□□ -2.16
SPO20YMR017W FIT1Q04433 528 aa1.53□□□□□ -2.16
SPO20YMR017W LCL2Q08045 131 aa1.53□□□□□ -2.16
SPO20YMR017W EFG1Q3E705 233 aaKnown RBP1.53□□□□□ -2.16
SPO20YMR017W AIM18P38884 321 aa1.52□□□□□ -2.17
SPO20YMR017W YEL028WP39989 153 aa1.52□□□□□ -2.17
SPO20YMR017W SMX2P40204 77 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms