RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeastyeast

Gene YPT6, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT6YLR262C RPL43BP0CX26 92 aa0.29□□□□□ -2.36
YPT6YLR262C RCF2P53721 224 aa0.29□□□□□ -2.36
YPT6YLR262C LSM3P57743 89 aaKnown RBP0.29□□□□□ -2.36
YPT6YLR262C UBI4P0CG63 381 aaKnown RBP0.28□□□□□ -2.36
YPT6YLR262C RPL30P14120 105 aaKnown RBP0.27□□□□□ -2.37
YPT6YLR262C YER121WP40076 114 aa0.27□□□□□ -2.37
YPT6YLR262C SEN15Q04675 128 aa0.27□□□□□ -2.37
YPT6YLR262C IRC19Q07843 230 aa0.27□□□□□ -2.37
YPT6YLR262C RPL33AP05744 107 aaKnown RBP0.26□□□□□ -2.37
YPT6YLR262C FES1P38260 290 aa0.26□□□□□ -2.37
YPT6YLR262C YLR307C-AQ3E825 87 aa0.26□□□□□ -2.37
YPT6YLR262C FIP1P45976 327 aa0.25□□□□□ -2.37
YPT6YLR262C YPR153WQ06537 140 aa0.25□□□□□ -2.37
YPT6YLR262C YPR202WQ08993 238 aa0.25□□□□□ -2.37
YPT6YLR262C CHD1P32657 1468 aa0.24□□□□□ -2.37
YPT6YLR262C RFU1Q08003 200 aa0.24□□□□□ -2.37
YPT6YLR262C RIB3Q99258 208 aa0.24□□□□□ -2.37
YPT6YLR262C YLR157W-EP0CF00 54 aa0.23□□□□□ -2.37
YPT6YLR262C SLM6P38343 150 aa0.23□□□□□ -2.37
YPT6YLR262C GIM5Q04493 163 aa0.23□□□□□ -2.37
YPT6YLR262C RDI1Q12434 202 aa0.23□□□□□ -2.37
YPT6YLR262C SRP21P32342 167 aa0.22□□□□□ -2.37
YPT6YLR262C DLS1P40366 167 aa0.22□□□□□ -2.37
YPT6YLR262C GPI11Q06636 219 aa0.22□□□□□ -2.37
YPT6YLR262C YJL218WP40892 196 aaKnown RBP0.21□□□□□ -2.38
YPT6YLR262C YDR476CQ03362 224 aa0.21□□□□□ -2.38
YPT6YLR262C MAK3Q03503 176 aa0.21□□□□□ -2.38
YPT6YLR262C YJL009WP47078 108 aa0.2□□□□□ -2.38
YPT6YLR262C DIE2P50076 525 aa0.2□□□□□ -2.38
YPT6YLR262C YGL014C-AP0C5N1 53 aa0.19□□□□□ -2.38
YPT6YLR262C NHP6AP11632 93 aaKnown RBP0.19□□□□□ -2.38
YPT6YLR262C PHO13P19881 312 aa0.19□□□□□ -2.38
YPT6YLR262C YLR053CQ12026 108 aa0.19□□□□□ -2.38
YPT6YLR262C CDC39P25655 2108 aaKnown RBP0.19□□□□□ -2.38
YPT6YLR262C PEX34P25584 144 aa0.18□□□□□ -2.38
YPT6YLR262C APQ12P40532 138 aa0.18□□□□□ -2.38
YPT6YLR262C YHR140WP38842 239 aa0.17□□□□□ -2.38
YPT6YLR262C COX5BP00425 151 aa0.16□□□□□ -2.38
YPT6YLR262C VPS51P36116 164 aa0.16□□□□□ -2.38
YPT6YLR262C MRPL24P36525 258 aaPredicted RBP0.16□□□□□ -2.38
YPT6YLR262C GPI2P46961 280 aa0.16□□□□□ -2.38
YPT6YLR262C YOR034C-AQ3E735 80 aa0.16□□□□□ -2.38
YPT6YLR262C UBR1P19812 1950 aa0.15□□□□□ -2.38
YPT6YLR262C YER181CP40097 107 aa0.15□□□□□ -2.39
YPT6YLR262C EST3Q03096 181 aa0.15□□□□□ -2.39
YPT6YLR262C IRC21Q04772 201 aa0.15□□□□□ -2.39
YPT6YLR262C RRT7Q07829 113 aa0.15□□□□□ -2.39
YPT6YLR262C DDR48P18899 430 aaKnown RBP0.14□□□□□ -2.39
YPT6YLR262C SRL3P36167 246 aa0.14□□□□□ -2.39
YPT6YLR262C ATP19P81451 68 aa0.14□□□□□ -2.39
YPT6YLR262C YMR122CQ03879 124 aa0.14□□□□□ -2.39
YPT6YLR262C CMC2Q3E7A4 109 aa0.13□□□□□ -2.39
YPT6YLR262C SCS22Q6Q595 175 aa0.13□□□□□ -2.39
YPT6YLR262C QCR2P07257 368 aa0.12□□□□□ -2.39
YPT6YLR262C YPD1Q07688 167 aa0.12□□□□□ -2.39
YPT6YLR262C SAC3P46674 1301 aa0.12□□□□□ -2.39
YPT6YLR262C RPS28BP0C0X0 67 aaKnown RBP0.11□□□□□ -2.39
YPT6YLR262C BUB2P26448 306 aaPredicted RBP0.11□□□□□ -2.39
YPT6YLR262C LST8P41318 303 aa0.11□□□□□ -2.39
YPT6YLR262C MVB12P42939 101 aa0.11□□□□□ -2.39
YPT6YLR262C FIT3Q08907 204 aa0.11□□□□□ -2.39
YPT6YLR262C HUT1Q12520 339 aa0.11□□□□□ -2.39
YPT6YLR262C RPS28AQ3E7X9 67 aaPredicted RBP0.11□□□□□ -2.39
YPT6YLR262C HUG1Q6Q5K6 68 aa0.11□□□□□ -2.39
YPT6YLR262C LAA1P39526 2014 aa0.11□□□□□ -2.39
YPT6YLR262C MHF1Q3E835 90 aa0.1□□□□□ -2.39
YPT6YLR262C COA6Q3E846 104 aa0.09□□□□□ -2.4
YPT6YLR262C PBI2P0CT04 75 aaKnown RBP0.08□□□□□ -2.4
YPT6YLR262C FYV5P25585 152 aa0.08□□□□□ -2.4
YPT6YLR262C AME1P38313 324 aa0.08□□□□□ -2.4
YPT6YLR262C COA4Q05809 96 aa0.07□□□□□ -2.4
YPT6YLR262C YNL019CP53975 284 aa0.06□□□□□ -2.4
YPT6YLR262C URA2P07259 2214 aaKnown RBP0.06□□□□□ -2.4
YPT6YLR262C NMT1P14743 455 aa0.05□□□□□ -2.4
YPT6YLR262C RPS1BP23248 255 aaKnown RBP0.05□□□□□ -2.4
YPT6YLR262C DER1P38307 211 aa0.05□□□□□ -2.4
YPT6YLR262C YCL001W-AP87012 153 aa0.05□□□□□ -2.4
YPT6YLR262C EFG1Q3E705 233 aaKnown RBP0.05□□□□□ -2.4
YPT6YLR262C GSC2P40989 1895 aa0.04□□□□□ -2.4
YPT6YLR262C YHR213WP0CI67 198 aa0.04□□□□□ -2.4
YPT6YLR262C RME1P32338 300 aaKnown RBP0.04□□□□□ -2.4
YPT6YLR262C IPI1P38803 334 aaPredicted RBP0.04□□□□□ -2.4
YPT6YLR262C SOM1Q05676 74 aa0.04□□□□□ -2.4
YPT6YLR262C NSL1Q12143 216 aa0.04□□□□□ -2.4
YPT6YLR262C RPL40AP0CH08 128 aaKnown RBP0.03□□□□□ -2.4
YPT6YLR262C RPL40BP0CH09 128 aaKnown RBP0.03□□□□□ -2.4
YPT6YLR262C VMA10P48836 114 aaKnown RBP0.03□□□□□ -2.4
YPT6YLR262C YMR321CQ04898 105 aa0.03□□□□□ -2.4
YPT6YLR262C SNF2P22082 1703 aa0.03□□□□□ -2.4
YPT6YLR262C ANB1P19211 157 aa0.02□□□□□ -2.41
YPT6YLR262C HSP12P22943 109 aaKnown RBP0.02□□□□□ -2.41
YPT6YLR262C AIM4P38305 123 aaPredicted RBP0.02□□□□□ -2.41
YPT6YLR262C KTI11Q3E840 82 aa0.02□□□□□ -2.41
YPT6YLR262C BLM10P43583 2143 aa0.02□□□□□ -2.41
YPT6YLR262C PHB1P40961 287 aa0.01□□□□□ -2.41
YPT6YLR262C DDP1Q99321 188 aaKnown RBP0.01□□□□□ -2.41
YPT6YLR262C YBR013CP38215 129 aa-0.01□□□□□ -2.41
YPT6YLR262C YGR201CP42936 225 aa-0.02□□□□□ -2.41
YPT6YLR262C EMC4P53073 190 aa-0.02□□□□□ -2.41
YPT6YLR262C YOR385WQ08909 290 aa-0.02□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms