RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W PHS1P40857 217 aa4.45□□□□□ -1.7
PWP1YLR196W LYS5P50113 272 aa4.45□□□□□ -1.7
PWP1YLR196W YGL262WP53054 175 aa4.45□□□□□ -1.7
PWP1YLR196W SUN4P53616 420 aa4.45□□□□□ -1.7
PWP1YLR196W CSL4P53859 292 aaPredicted RBP4.45□□□□□ -1.7
PWP1YLR196W ADD37Q03233 198 aa4.45□□□□□ -1.7
PWP1YLR196W ATG41Q12048 136 aa4.45□□□□□ -1.7
PWP1YLR196W YDR119W-AQ2V2P9 66 aa4.45□□□□□ -1.7
PWP1YLR196W MSB2P32334 1306 aa4.45□□□□□ -1.7
PWP1YLR196W RPA12P32529 125 aaKnown RBP4.44□□□□□ -1.7
PWP1YLR196W RPB7P34087 171 aa4.44□□□□□ -1.7
PWP1YLR196W INM1P38710 295 aa4.44□□□□□ -1.7
PWP1YLR196W CTK2P46962 323 aa4.44□□□□□ -1.7
PWP1YLR196W CAX4P53223 239 aa4.44□□□□□ -1.7
PWP1YLR196W ROT1Q03691 256 aa4.44□□□□□ -1.7
PWP1YLR196W ELP6Q04868 273 aa4.44□□□□□ -1.7
PWP1YLR196W MET32Q12041 191 aa4.44□□□□□ -1.7
PWP1YLR196W MDM10P18409 493 aa4.43□□□□□ -1.7
PWP1YLR196W RPS2P25443 254 aaKnown RBP4.43□□□□□ -1.7
PWP1YLR196W PAM17P36147 197 aa4.43□□□□□ -1.7
PWP1YLR196W YJL028WP47062 111 aa4.43□□□□□ -1.7
PWP1YLR196W VPS25P47142 202 aa4.43□□□□□ -1.7
PWP1YLR196W BUD25P85052 153 aa4.43□□□□□ -1.7
PWP1YLR196W YLR346CQ06139 101 aa4.43□□□□□ -1.7
PWP1YLR196W MRS3P10566 314 aa4.43□□□□□ -1.7
PWP1YLR196W FYV4P38783 130 aaPredicted RBP4.43□□□□□ -1.7
PWP1YLR196W YPR098CQ06089 161 aa4.43□□□□□ -1.7
PWP1YLR196W DFM1Q12743 341 aaKnown RBP4.43□□□□□ -1.7
PWP1YLR196W KSH1Q8TGJ3 72 aa4.43□□□□□ -1.7
PWP1YLR196W CCH1P50077 2039 aa4.42□□□□□ -1.7
PWP1YLR196W SEC11P15367 167 aa4.42□□□□□ -1.7
PWP1YLR196W ARF2P19146 181 aaKnown RBP4.42□□□□□ -1.7
PWP1YLR196W YHR140WP38842 239 aa4.42□□□□□ -1.7
PWP1YLR196W YFR054CP43622 192 aa4.42□□□□□ -1.7
PWP1YLR196W YMR252CQ04814 134 aa4.42□□□□□ -1.7
PWP1YLR196W RAF1Q06891 181 aa4.42□□□□□ -1.7
PWP1YLR196W SUT2Q12286 268 aa4.42□□□□□ -1.7
PWP1YLR196W HEM4P06174 275 aa4.41□□□□□ -1.7
PWP1YLR196W URA5P13298 226 aaKnown RBP4.41□□□□□ -1.7
PWP1YLR196W YAR029WP39549 74 aa4.41□□□□□ -1.7
PWP1YLR196W YER134CP40081 178 aa4.41□□□□□ -1.7
PWP1YLR196W YIL165CP40446 119 aa4.41□□□□□ -1.7
PWP1YLR196W GPI2P46961 280 aa4.41□□□□□ -1.7
PWP1YLR196W KNH1P50112 268 aa4.41□□□□□ -1.7
PWP1YLR196W HST4P53688 370 aa4.41□□□□□ -1.7
PWP1YLR196W STP4Q07351 490 aa4.41□□□□□ -1.7
PWP1YLR196W RLM1Q12224 676 aa4.41□□□□□ -1.7
PWP1YLR196W TAD3Q9URQ3 322 aa4.41□□□□□ -1.7
PWP1YLR196W TRP1P00912 224 aa4.41□□□□□ -1.7
PWP1YLR196W YCR050CP25630 102 aa4.41□□□□□ -1.7
PWP1YLR196W PTH1P38876 190 aaKnown RBP4.41□□□□□ -1.7
PWP1YLR196W YML079WQ03629 201 aa4.41□□□□□ -1.7
PWP1YLR196W ATO3Q12359 275 aa4.41□□□□□ -1.7
PWP1YLR196W PCL9Q12477 304 aa4.41□□□□□ -1.7
PWP1YLR196W PUB1P32588 453 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
PWP1YLR196W MIC27P50945 234 aa4.4□□□□□ -1.71
PWP1YLR196W PBP4Q07362 185 aaKnown RBP4.4□□□□□ -1.71
PWP1YLR196W RRS1Q08746 203 aaKnown RBP4.4□□□□□ -1.71
PWP1YLR196W RFM1Q12192 310 aa4.4□□□□□ -1.71
PWP1YLR196W RPL30P14120 105 aaKnown RBP4.39□□□□□ -1.71
PWP1YLR196W SWD2P36104 329 aaPredicted RBP4.39□□□□□ -1.71
PWP1YLR196W PAU24P38155 120 aa4.39□□□□□ -1.71
PWP1YLR196W SVP26P38869 228 aa4.39□□□□□ -1.71
PWP1YLR196W HSP10P38910 106 aa4.39□□□□□ -1.71
PWP1YLR196W MBB1P39534 108 aa4.39□□□□□ -1.71
PWP1YLR196W ASM4Q05166 528 aa4.39□□□□□ -1.71
PWP1YLR196W YOL162WP0CF19 215 aa4.38□□□□□ -1.71
PWP1YLR196W YGL010WP25338 174 aa4.38□□□□□ -1.71
PWP1YLR196W YMC1P32331 307 aa4.38□□□□□ -1.71
PWP1YLR196W YHL018WP38744 120 aaPredicted RBP4.38□□□□□ -1.71
PWP1YLR196W BUD8P41698 603 aa4.38□□□□□ -1.71
PWP1YLR196W PAU12P53343 120 aa4.38□□□□□ -1.71
PWP1YLR196W TDA7P53882 636 aaPredicted RBP4.38□□□□□ -1.71
PWP1YLR196W SHH4Q06236 168 aa4.38□□□□□ -1.71
PWP1YLR196W YDL007C-AQ2V2Q0 85 aa4.38□□□□□ -1.71
PWP1YLR196W YDR524C-BQ3E6R4 66 aa4.38□□□□□ -1.71
PWP1YLR196W YAL063C-AQ3E791 96 aa4.38□□□□□ -1.71
PWP1YLR196W YFL041W-AQ3E817 63 aa4.38□□□□□ -1.71
PWP1YLR196W YBR292CP38357 123 aa4.38□□□□□ -1.71
PWP1YLR196W GGC1P38988 300 aa4.38□□□□□ -1.71
PWP1YLR196W OST1P41543 476 aaKnown RBP4.38□□□□□ -1.71
PWP1YLR196W DSK2P48510 373 aa4.38□□□□□ -1.71
PWP1YLR196W CPD1P53314 239 aa4.38□□□□□ -1.71
PWP1YLR196W ATP23P53722 227 aa4.38□□□□□ -1.71
PWP1YLR196W GPI19Q04082 140 aa4.38□□□□□ -1.71
PWP1YLR196W YLR296WQ05898 108 aa4.38□□□□□ -1.71
PWP1YLR196W MSA1Q08471 629 aa4.38□□□□□ -1.71
PWP1YLR196W YCR024C-BQ3E7Z8 88 aa4.38□□□□□ -1.71
PWP1YLR196W YCL021W-AQ96VH3 125 aa4.38□□□□□ -1.71
PWP1YLR196W ERG4P25340 473 aa4.37□□□□□ -1.71
PWP1YLR196W RFA2P26754 273 aaKnown RBP4.37□□□□□ -1.71
PWP1YLR196W QRI5P32344 111 aa4.37□□□□□ -1.71
PWP1YLR196W TOM6P33448 61 aa4.37□□□□□ -1.71
PWP1YLR196W RPL14AP36105 138 aaKnown RBP4.37□□□□□ -1.71
PWP1YLR196W SMP1P38128 452 aa4.37□□□□□ -1.71
PWP1YLR196W YBL081WP38180 368 aaKnown RBP4.37□□□□□ -1.71
PWP1YLR196W GAT4P40569 121 aa4.37□□□□□ -1.71
PWP1YLR196W GAT3Q07928 141 aa4.37□□□□□ -1.71
PWP1YLR196W YPR064WQ12492 139 aa4.37□□□□□ -1.71
PWP1YLR196W CNE1P27825 502 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 90.8 ms