RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeastyeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRT3YLR097C UGX2P32772 223 aa1.59□□□□□ -2.15
HRT3YLR097C YER181CP40097 107 aa1.59□□□□□ -2.15
HRT3YLR097C FMN1Q03778 218 aa1.59□□□□□ -2.15
HRT3YLR097C AIM36Q03798 255 aa1.59□□□□□ -2.15
HRT3YLR097C NMA1Q06178 401 aaKnown RBP1.59□□□□□ -2.15
HRT3YLR097C VAM10Q08474 114 aa1.58□□□□□ -2.16
HRT3YLR097C CMC4Q3E7A9 73 aa1.58□□□□□ -2.16
HRT3YLR097C YGL041W-AP0C5N3 154 aa1.57□□□□□ -2.16
HRT3YLR097C HSP150P32478 413 aa1.56□□□□□ -2.16
HRT3YLR097C ARC19P33204 171 aaKnown RBP1.56□□□□□ -2.16
HRT3YLR097C ECM31P38122 312 aa1.56□□□□□ -2.16
HRT3YLR097C RCF2P53721 224 aa1.56□□□□□ -2.16
HRT3YLR097C SMD2Q06217 110 aaKnown RBP1.56□□□□□ -2.16
HRT3YLR097C RRT7Q07829 113 aa1.56□□□□□ -2.16
HRT3YLR097C RFU1Q08003 200 aa1.56□□□□□ -2.16
HRT3YLR097C PHO13P19881 312 aa1.55□□□□□ -2.16
HRT3YLR097C SRP21P32342 167 aa1.55□□□□□ -2.16
HRT3YLR097C YBR027CP38220 110 aa1.55□□□□□ -2.16
HRT3YLR097C RIF1P29539 1916 aa1.55□□□□□ -2.16
HRT3YLR097C MRPL24P36525 258 aaPredicted RBP1.54□□□□□ -2.16
HRT3YLR097C ATP19P81451 68 aa1.54□□□□□ -2.16
HRT3YLR097C TMA23Q03525 211 aa1.54□□□□□ -2.16
HRT3YLR097C IRC19Q07843 230 aa1.54□□□□□ -2.16
HRT3YLR097C PET20Q99373 253 aa1.54□□□□□ -2.16
HRT3YLR097C FMP49A0A023PZB3 126 aa1.53□□□□□ -2.16
HRT3YLR097C YJL218WP40892 196 aaKnown RBP1.53□□□□□ -2.16
HRT3YLR097C EFM5P53200 248 aaKnown RBP1.53□□□□□ -2.16
HRT3YLR097C YCR001WP25347 104 aa1.52□□□□□ -2.17
HRT3YLR097C HYP2P23301 157 aaKnown RBP1.51□□□□□ -2.17
HRT3YLR097C IPT1P38954 527 aa1.51□□□□□ -2.17
HRT3YLR097C DDR48P18899 430 aaKnown RBP1.5□□□□□ -2.17
HRT3YLR097C RAV2Q03956 351 aa1.5□□□□□ -2.17
HRT3YLR097C SCS22Q6Q595 175 aa1.5□□□□□ -2.17
HRT3YLR097C GPI2P46961 280 aa1.49□□□□□ -2.17
HRT3YLR097C PKR1Q03880 122 aaKnown RBP1.49□□□□□ -2.17
HRT3YLR097C ACP1P32463 125 aa1.48□□□□□ -2.17
HRT3YLR097C YPR153WQ06537 140 aa1.48□□□□□ -2.17
HRT3YLR097C YOL013W-AP0C272 63 aaPredicted RBP1.47□□□□□ -2.17
HRT3YLR097C ATG8P38182 117 aaRIP-Chip data1.47□□□□□ -2.17not detected
HRT3YLR097C EST3Q03096 181 aa1.47□□□□□ -2.17
HRT3YLR097C GPI11Q06636 219 aa1.47□□□□□ -2.17
HRT3YLR097C PET54P10834 293 aa1.46□□□□□ -2.18
HRT3YLR097C HSP12P22943 109 aaKnown RBP1.46□□□□□ -2.18
HRT3YLR097C VMA10P48836 114 aaKnown RBP1.46□□□□□ -2.18
HRT3YLR097C MOG1P47123 218 aa1.45□□□□□ -2.18
HRT3YLR097C YNL122CP53921 115 aaPredicted RBP1.45□□□□□ -2.18
HRT3YLR097C NHP6AP11632 93 aaKnown RBP1.44□□□□□ -2.18
HRT3YLR097C IPI1P38803 334 aaPredicted RBP1.44□□□□□ -2.18
HRT3YLR097C SED1Q01589 338 aa1.44□□□□□ -2.18
HRT3YLR097C RIB3Q99258 208 aa1.43□□□□□ -2.18
HRT3YLR097C POP7P38291 140 aa1.42□□□□□ -2.18
HRT3YLR097C YOR072WQ08486 104 aa1.42□□□□□ -2.18
HRT3YLR097C RPL33AP05744 107 aaKnown RBP1.41□□□□□ -2.18
HRT3YLR097C SPC2Q04969 178 aa1.41□□□□□ -2.18
HRT3YLR097C YOR1P53049 1477 aa1.4□□□□□ -2.19
HRT3YLR097C HAP2P06774 265 aa1.4□□□□□ -2.19
HRT3YLR097C LSM1P47017 172 aaKnown RBP1.4□□□□□ -2.19
HRT3YLR097C SEN15Q04675 128 aa1.4□□□□□ -2.19
HRT3YLR097C COX5BP00425 151 aa1.39□□□□□ -2.19
HRT3YLR097C YGR201CP42936 225 aa1.39□□□□□ -2.19
HRT3YLR097C YDR366CP87287 132 aa1.39□□□□□ -2.19
HRT3YLR097C HUT1Q12520 339 aa1.39□□□□□ -2.19
HRT3YLR097C MHF1Q3E835 90 aa1.39□□□□□ -2.19
HRT3YLR097C YHR213W-BQ8TGK1 99 aa1.39□□□□□ -2.19
HRT3YLR097C HFA1P32874 2273 aa1.39□□□□□ -2.19
HRT3YLR097C ROM2P51862 1356 aaKnown RBP1.38□□□□□ -2.19
HRT3YLR097C UBR1P19812 1950 aa1.38□□□□□ -2.19
HRT3YLR097C HHY1P39982 102 aa1.38□□□□□ -2.19
HRT3YLR097C YCL001W-AP87012 153 aa1.38□□□□□ -2.19
HRT3YLR097C HSL1P34244 1518 aa1.38□□□□□ -2.19
HRT3YLR097C RPS22AP0C0W1 130 aaKnown RBP1.37□□□□□ -2.19
HRT3YLR097C RPS1BP23248 255 aaKnown RBP1.37□□□□□ -2.19
HRT3YLR097C GIM4P40005 111 aaKnown RBP1.37□□□□□ -2.19
HRT3YLR097C DIE2P50076 525 aa1.37□□□□□ -2.19
HRT3YLR097C YGR042WP53227 271 aa1.37□□□□□ -2.19
HRT3YLR097C MGR2Q02889 113 aa1.37□□□□□ -2.19
HRT3YLR097C YMR320WQ04897 101 aa1.37□□□□□ -2.19
HRT3YLR097C RPS22BQ3E7Y3 130 aaKnown RBP1.37□□□□□ -2.19
HRT3YLR097C SKI3P17883 1432 aaKnown RBP1.37□□□□□ -2.19
HRT3YLR097C CDC39P25655 2108 aaKnown RBP1.36□□□□□ -2.19
HRT3YLR097C FYV5P25585 152 aa1.36□□□□□ -2.19
HRT3YLR097C SUI1P32911 108 aaKnown RBP1.36□□□□□ -2.19
HRT3YLR097C SRL3P36167 246 aa1.36□□□□□ -2.19
HRT3YLR097C ECM5Q03214 1411 aa1.36□□□□□ -2.19
HRT3YLR097C IRC21Q04772 201 aa1.36□□□□□ -2.19
HRT3YLR097C YAP3P38749 330 aa1.35□□□□□ -2.19
HRT3YLR097C SPC24Q04477 213 aa1.35□□□□□ -2.19
HRT3YLR097C SOM1Q05676 74 aa1.35□□□□□ -2.19
HRT3YLR097C YGL014C-AP0C5N1 53 aa1.34□□□□□ -2.19
HRT3YLR097C PHB1P40961 287 aa1.34□□□□□ -2.19
HRT3YLR097C RBL2P48606 106 aaKnown RBP1.34□□□□□ -2.19
HRT3YLR097C YGL204CP53089 101 aa1.34□□□□□ -2.19
HRT3YLR097C RAF1Q06891 181 aa1.34□□□□□ -2.19
HRT3YLR097C LSM8P47093 109 aaKnown RBP1.33□□□□□ -2.2
HRT3YLR097C SPG1P50088 95 aa1.33□□□□□ -2.2
HRT3YLR097C DDP1Q99321 188 aaKnown RBP1.33□□□□□ -2.2
HRT3YLR097C MDS3P53094 1487 aa1.32□□□□□ -2.2
HRT3YLR097C CYC2P38909 366 aa1.32□□□□□ -2.2
HRT3YLR097C YJL009WP47078 108 aa1.32□□□□□ -2.2
HRT3YLR097C YNL019CP53975 284 aa1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms