RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C TEM1P38987 245 aa2.16□□□□□ -2.06
SDO1YLR022C RRG9P40156 214 aa2.16□□□□□ -2.06
SDO1YLR022C MPM1P40364 252 aa2.16□□□□□ -2.06
SDO1YLR022C SYS1P41544 203 aa2.16□□□□□ -2.06
SDO1YLR022C CAT5P41735 233 aa2.16□□□□□ -2.06
SDO1YLR022C NEJ1Q06148 342 aa2.16□□□□□ -2.06
SDO1YLR022C YAL063C-AQ3E791 96 aa2.16□□□□□ -2.06
SDO1YLR022C YOR020W-AQ3E824 90 aa2.16□□□□□ -2.06
SDO1YLR022C HTL1Q9URQ5 78 aa2.16□□□□□ -2.06
SDO1YLR022C SEC4P07560 215 aaKnown RBP2.15□□□□□ -2.07
SDO1YLR022C MRPL38P35996 138 aaPredicted RBP2.15□□□□□ -2.07
SDO1YLR022C DOG2P38773 246 aa2.15□□□□□ -2.07
SDO1YLR022C DOG1P38774 246 aa2.15□□□□□ -2.07
SDO1YLR022C RIO2P40160 425 aaKnown RBP2.15□□□□□ -2.07
SDO1YLR022C DLS1P40366 167 aa2.15□□□□□ -2.07
SDO1YLR022C AIM25P47140 327 aa2.15□□□□□ -2.07
SDO1YLR022C ERV29P53337 310 aa2.15□□□□□ -2.07
SDO1YLR022C SGF11Q03067 99 aa2.15□□□□□ -2.07
SDO1YLR022C YMR099CQ03161 297 aaKnown RBP2.15□□□□□ -2.07
SDO1YLR022C YMR244WQ04018 355 aa2.15□□□□□ -2.07
SDO1YLR022C YMR315WQ04869 349 aaKnown RBP2.15□□□□□ -2.07
SDO1YLR022C YPD1Q07688 167 aa2.15□□□□□ -2.07
SDO1YLR022C YPL257WQ08974 193 aa2.15□□□□□ -2.07
SDO1YLR022C HUT1Q12520 339 aa2.15□□□□□ -2.07
SDO1YLR022C DFM1Q12743 341 aaKnown RBP2.15□□□□□ -2.07
SDO1YLR022C YOS1Q3E834 85 aa2.15□□□□□ -2.07
SDO1YLR022C ISD11Q6Q560 94 aa2.15□□□□□ -2.07
SDO1YLR022C ADH3P07246 375 aaKnown RBP2.14□□□□□ -2.07
SDO1YLR022C MAG1P22134 296 aaKnown RBP2.14□□□□□ -2.07
SDO1YLR022C SEC22P22214 214 aa2.14□□□□□ -2.07
SDO1YLR022C TFC1P32367 649 aa2.14□□□□□ -2.07
SDO1YLR022C MRPL27P36526 146 aaPredicted RBP2.14□□□□□ -2.07
SDO1YLR022C SMP1P38128 452 aa2.14□□□□□ -2.07
SDO1YLR022C YBR032WP38223 100 aa2.14□□□□□ -2.07
SDO1YLR022C RRT13P40042 185 aa2.14□□□□□ -2.07
SDO1YLR022C MIG2P53035 382 aa2.14□□□□□ -2.07
SDO1YLR022C GGA1Q06336 557 aa2.14□□□□□ -2.07
SDO1YLR022C YPL264CQ08980 353 aa2.14□□□□□ -2.07
SDO1YLR022C YOR283WQ12040 230 aaKnown RBP2.14□□□□□ -2.07
SDO1YLR022C ATG5Q12380 294 aa2.14□□□□□ -2.07
SDO1YLR022C RDI1Q12434 202 aa2.14□□□□□ -2.07
SDO1YLR022C PET20Q99373 253 aa2.14□□□□□ -2.07
SDO1YLR022C CDC7P06243 507 aa2.13□□□□□ -2.07
SDO1YLR022C FCY2P17064 533 aa2.13□□□□□ -2.07
SDO1YLR022C RNP1P32385 249 aa2.13□□□□□ -2.07
SDO1YLR022C COS8P38723 381 aa2.13□□□□□ -2.07
SDO1YLR022C YER076CP40049 302 aa2.13□□□□□ -2.07
SDO1YLR022C YJL028WP47062 111 aa2.13□□□□□ -2.07
SDO1YLR022C MOG1P47123 218 aa2.13□□□□□ -2.07
SDO1YLR022C YNL184CP53876 108 aa2.13□□□□□ -2.07
SDO1YLR022C PGA1P53896 198 aa2.13□□□□□ -2.07
SDO1YLR022C COG5P53951 403 aa2.13□□□□□ -2.07
SDO1YLR022C TMA20P89886 181 aaPredicted RBP2.13□□□□□ -2.07
SDO1YLR022C ECM19Q06011 112 aa2.13□□□□□ -2.07
SDO1YLR022C YLR031WQ07978 186 aa2.13□□□□□ -2.07
SDO1YLR022C AHC2P25649 128 aa2.12□□□□□ -2.07
SDO1YLR022C UPS2P35200 230 aa2.12□□□□□ -2.07
SDO1YLR022C YKR041WP36134 250 aa2.12□□□□□ -2.07
SDO1YLR022C RPF1P38805 295 aaKnown RBP2.12□□□□□ -2.07
SDO1YLR022C NVJ1P38881 321 aa2.12□□□□□ -2.07
SDO1YLR022C GLE2P40066 365 aa2.12□□□□□ -2.07
SDO1YLR022C ERJ5P43613 295 aaPredicted RBP2.12□□□□□ -2.07
SDO1YLR022C TDA4P47153 279 aa2.12□□□□□ -2.07
SDO1YLR022C YGR042WP53227 271 aa2.12□□□□□ -2.07
SDO1YLR022C YGR050CP53231 118 aa2.12□□□□□ -2.07
SDO1YLR022C YGR219WP53307 113 aa2.12□□□□□ -2.07
SDO1YLR022C SAY1P53324 424 aa2.12□□□□□ -2.07
SDO1YLR022C AIM34Q03673 198 aa2.12□□□□□ -2.07
SDO1YLR022C FIT1Q04433 528 aa2.12□□□□□ -2.07
SDO1YLR022C DYN3Q04949 312 aa2.12□□□□□ -2.07
SDO1YLR022C IRC23Q08416 157 aa2.12□□□□□ -2.07
SDO1YLR022C YOR289WQ12012 251 aaPredicted RBP2.12□□□□□ -2.07
SDO1YLR022C YPR014CQ6B0W2 109 aa2.12□□□□□ -2.07
SDO1YLR022C YAL067W-AQ8TGK6 75 aa2.12□□□□□ -2.07
SDO1YLR022C YPL229WQ99395 206 aa2.12□□□□□ -2.07
SDO1YLR022C PBI2P0CT04 75 aaKnown RBP2.11□□□□□ -2.07
SDO1YLR022C PET54P10834 293 aa2.11□□□□□ -2.07
SDO1YLR022C ERG24P32462 438 aaKnown RBP2.11□□□□□ -2.07
SDO1YLR022C YKR045CP36138 183 aa2.11□□□□□ -2.07
SDO1YLR022C SNX4P47057 423 aa2.11□□□□□ -2.07
SDO1YLR022C UBC12P52491 188 aa2.11□□□□□ -2.07
SDO1YLR022C LPP1Q04396 274 aa2.11□□□□□ -2.07
SDO1YLR022C ELP6Q04868 273 aa2.11□□□□□ -2.07
SDO1YLR022C SHH4Q06236 168 aa2.11□□□□□ -2.07
SDO1YLR022C GPI11Q06636 219 aa2.11□□□□□ -2.07
SDO1YLR022C YOL160WQ08321 113 aa2.11□□□□□ -2.07
SDO1YLR022C YPR013CQ12145 317 aa2.11□□□□□ -2.07
SDO1YLR022C TIM22Q12328 207 aa2.11□□□□□ -2.07
SDO1YLR022C PRM7Q12459 698 aa2.11□□□□□ -2.07
SDO1YLR022C TDA8Q6B2U8 126 aa2.11□□□□□ -2.07
SDO1YLR022C MBF1O14467 151 aaKnown RBP2.1□□□□□ -2.07
SDO1YLR022C CNB1P25296 175 aa2.1□□□□□ -2.07
SDO1YLR022C YCR001WP25347 104 aa2.1□□□□□ -2.07
SDO1YLR022C YCR101CP25607 182 aa2.1□□□□□ -2.07
SDO1YLR022C ARO7P32178 256 aa2.1□□□□□ -2.07
SDO1YLR022C RCN1P36054 211 aa2.1□□□□□ -2.07
SDO1YLR022C VMA22P38784 181 aa2.1□□□□□ -2.07
SDO1YLR022C YAR068WP39564 161 aa2.1□□□□□ -2.07
SDO1YLR022C CCS1P40202 249 aaKnown RBP2.1□□□□□ -2.07
SDO1YLR022C HPM1P40481 377 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms