RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W YIL165CP40446 119 aa5□□□□□ -1.61
SKN1YGR143W CAX4P53223 239 aa5□□□□□ -1.61
SKN1YGR143W YGL010WP25338 174 aa4.99□□□□□ -1.61
SKN1YGR143W MKK1P32490 508 aa4.99□□□□□ -1.61
SKN1YGR143W PAU24P38155 120 aa4.99□□□□□ -1.61
SKN1YGR143W YEA4P40004 342 aa4.99□□□□□ -1.61
SKN1YGR143W BUD25P85052 153 aa4.99□□□□□ -1.61
SKN1YGR143W NRG1Q03125 231 aa4.99□□□□□ -1.61
SKN1YGR143W YML079WQ03629 201 aa4.99□□□□□ -1.61
SKN1YGR143W YDR119W-AQ2V2P9 66 aa4.99□□□□□ -1.61
SKN1YGR143W YLR412C-AQ3E742 68 aa4.99□□□□□ -1.61
SKN1YGR143W BOL1Q3E793 110 aa4.99□□□□□ -1.61
SKN1YGR143W IRA1P18963 3092 aa4.99□□□□□ -1.61
SKN1YGR143W RPL2AP0CX45 254 aaKnown RBP4.98□□□□□ -1.61
SKN1YGR143W RPL2BP0CX46 254 aaKnown RBP4.98□□□□□ -1.61
SKN1YGR143W CTF8P38877 133 aa4.98□□□□□ -1.61
SKN1YGR143W PEX22P39718 180 aa4.98□□□□□ -1.61
SKN1YGR143W ERF2Q06551 359 aa4.98□□□□□ -1.61
SKN1YGR143W YOR385WQ08909 290 aa4.98□□□□□ -1.61
SKN1YGR143W FCY1Q12178 158 aa4.98□□□□□ -1.61
SKN1YGR143W YOR097CQ12274 175 aaPredicted RBP4.98□□□□□ -1.61
SKN1YGR143W MDM10P18409 493 aa4.98□□□□□ -1.61
SKN1YGR143W RPS2P25443 254 aaKnown RBP4.98□□□□□ -1.61
SKN1YGR143W CUP9P41817 306 aa4.98□□□□□ -1.61
SKN1YGR143W GLO1P50107 326 aa4.98□□□□□ -1.61
SKN1YGR143W GPI19Q04082 140 aa4.98□□□□□ -1.61
SKN1YGR143W YNL277W-AQ3E7Z0 62 aa4.98□□□□□ -1.61
SKN1YGR143W PAM17P36147 197 aa4.97□□□□□ -1.61
SKN1YGR143W ARC40P38328 384 aaKnown RBP4.97□□□□□ -1.61
SKN1YGR143W FYV4P38783 130 aaPredicted RBP4.97□□□□□ -1.61
SKN1YGR143W CTK2P46962 323 aa4.97□□□□□ -1.61
SKN1YGR143W YNR071CP53757 342 aa4.97□□□□□ -1.61
SKN1YGR143W VPS71Q03433 280 aa4.97□□□□□ -1.61
SKN1YGR143W HEM4P06174 275 aa4.97□□□□□ -1.61
SKN1YGR143W PBI2P0CT04 75 aaKnown RBP4.97□□□□□ -1.61
SKN1YGR143W RPL18AP0CX49 186 aaKnown RBP4.97□□□□□ -1.61
SKN1YGR143W RPL18BP0CX50 186 aaKnown RBP4.97□□□□□ -1.61
SKN1YGR143W RPB7P34087 171 aa4.97□□□□□ -1.61
SKN1YGR143W SWD2P36104 329 aaPredicted RBP4.97□□□□□ -1.61
SKN1YGR143W MIC27P50945 234 aa4.97□□□□□ -1.61
SKN1YGR143W RPL21AQ02753 160 aaKnown RBP4.97□□□□□ -1.61
SKN1YGR143W RPL21BQ12672 160 aaKnown RBP4.97□□□□□ -1.61
SKN1YGR143W RPL28P02406 149 aaKnown RBP4.96□□□□□ -1.61
SKN1YGR143W SWS2P53937 143 aa4.96□□□□□ -1.61
SKN1YGR143W RAF1Q06891 181 aa4.96□□□□□ -1.61
SKN1YGR143W POL2P21951 2222 aaKnown RBP4.96□□□□□ -1.62
SKN1YGR143W NHP2P32495 156 aaPredicted RBP4.96□□□□□ -1.62
SKN1YGR143W PUB1P32588 453 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62 RIP-Chip
SKN1YGR143W PCL5P38794 229 aa4.96□□□□□ -1.62
SKN1YGR143W SGN1P40561 250 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
SKN1YGR143W BSC1Q12140 328 aa4.96□□□□□ -1.62
SKN1YGR143W DAD1Q12248 94 aa4.96□□□□□ -1.62
SKN1YGR143W YAL063C-AQ3E791 96 aa4.96□□□□□ -1.62
SKN1YGR143W YCR050CP25630 102 aa4.95□□□□□ -1.62
SKN1YGR143W RFA2P26754 273 aaKnown RBP4.95□□□□□ -1.62
SKN1YGR143W GPX1P36014 167 aa4.95□□□□□ -1.62
SKN1YGR143W YBR292CP38357 123 aa4.95□□□□□ -1.62
SKN1YGR143W CIS3P47001 227 aa4.95□□□□□ -1.62
SKN1YGR143W FSH2Q05015 223 aa4.95□□□□□ -1.62
SKN1YGR143W YPS3Q12303 508 aa4.95□□□□□ -1.62
SKN1YGR143W SPO24Q3E752 67 aa4.95□□□□□ -1.62
SKN1YGR143W TRP1P00912 224 aa4.95□□□□□ -1.62
SKN1YGR143W YLL053CP0CD98 152 aa4.95□□□□□ -1.62
SKN1YGR143W DAT1P13483 248 aaKnown RBP4.95□□□□□ -1.62
SKN1YGR143W MRP21P38175 177 aa4.95□□□□□ -1.62
SKN1YGR143W YAR029WP39549 74 aa4.95□□□□□ -1.62
SKN1YGR143W IGO1P53897 168 aa4.95□□□□□ -1.62
SKN1YGR143W RIM9Q04734 239 aa4.95□□□□□ -1.62
SKN1YGR143W SME1Q12330 94 aaPredicted RBP4.95□□□□□ -1.62
SKN1YGR143W KSH1Q8TGJ3 72 aa4.95□□□□□ -1.62
SKN1YGR143W RNQ1P25367 405 aa4.94□□□□□ -1.62
SKN1YGR143W RPA12P32529 125 aaKnown RBP4.94□□□□□ -1.62
SKN1YGR143W PAU12P53343 120 aa4.94□□□□□ -1.62
SKN1YGR143W MSA1Q08471 629 aa4.94□□□□□ -1.62
SKN1YGR143W CYR1P08678 2026 aaKnown RBP4.94□□□□□ -1.62
SKN1YGR143W PAU1P0CE88 120 aa4.94□□□□□ -1.62
SKN1YGR143W PAU14P0CE89 120 aa4.94□□□□□ -1.62
SKN1YGR143W PAU6P0CE90 120 aa4.94□□□□□ -1.62
SKN1YGR143W PAU18P0CE91 120 aa4.94□□□□□ -1.62
SKN1YGR143W PAU8P0CE92 120 aa4.94□□□□□ -1.62
SKN1YGR143W PAU11P0CE93 120 aa4.94□□□□□ -1.62
SKN1YGR143W PAU13P38725 120 aa4.94□□□□□ -1.62
SKN1YGR143W SNF11P38956 169 aa4.94□□□□□ -1.62
SKN1YGR143W DSK2P48510 373 aa4.94□□□□□ -1.62
SKN1YGR143W PAU4P53427 120 aa4.94□□□□□ -1.62
SKN1YGR143W PAU10Q03050 120 aa4.94□□□□□ -1.62
SKN1YGR143W PAU20Q08322 120 aa4.94□□□□□ -1.62
SKN1YGR143W PAU9Q3E770 120 aa4.94□□□□□ -1.62
SKN1YGR143W MRS3P10566 314 aa4.93□□□□□ -1.62
SKN1YGR143W MRS4P23500 304 aa4.93□□□□□ -1.62
SKN1YGR143W PAU2P32612 120 aa4.93□□□□□ -1.62
SKN1YGR143W YPL073CP40323 161 aa4.93□□□□□ -1.62
SKN1YGR143W VPS68Q12016 184 aa4.93□□□□□ -1.62
SKN1YGR143W YCL021W-AQ96VH3 125 aa4.93□□□□□ -1.62
SKN1YGR143W HEM2P05373 342 aa4.92□□□□□ -1.62
SKN1YGR143W YPR071WQ12346 211 aa4.92□□□□□ -1.62
SKN1YGR143W PCL9Q12477 304 aa4.92□□□□□ -1.62
SKN1YGR143W YFL041W-AQ3E817 63 aa4.92□□□□□ -1.62
SKN1YGR143W ELP6Q04868 273 aa4.92□□□□□ -1.62
SKN1YGR143W RPS21BQ3E754 87 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms