RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C YEL073CP39974 107 aa2.59□□□□□ -1.99
XRN1YGL173C TDA2P40045 126 aa2.59□□□□□ -1.99
XRN1YGL173C YPL278CQ08990 100 aa2.59□□□□□ -1.99
XRN1YGL173C RFU1Q08003 200 aa2.59□□□□□ -1.99
XRN1YGL173C YOR015WQ12169 119 aa2.59□□□□□ -1.99
XRN1YGL173C SAS5Q99314 248 aa2.59□□□□□ -1.99
XRN1YGL173C FMP46P36141 133 aaKnown RBP2.59□□□□□ -1.99
XRN1YGL173C RPS20P38701 121 aaKnown RBP2.59□□□□□ -1.99
XRN1YGL173C YPL039WQ03080 316 aa2.59□□□□□ -1.99
XRN1YGL173C SHH3Q04487 196 aa2.59□□□□□ -1.99
XRN1YGL173C ATP20Q12233 115 aa2.59□□□□□ -1.99
XRN1YGL173C SPS100P13130 326 aa2.59□□□□□ -2
XRN1YGL173C INO4P13902 151 aa2.59□□□□□ -2
XRN1YGL173C HSP30P25619 332 aa2.59□□□□□ -2
XRN1YGL173C ATP19P81451 68 aa2.59□□□□□ -2
XRN1YGL173C YLR042CQ07990 161 aa2.59□□□□□ -2
XRN1YGL173C FYV4P38783 130 aaPredicted RBP2.58□□□□□ -2
XRN1YGL173C YER188WP40103 239 aa2.58□□□□□ -2
XRN1YGL173C TDA8Q6B2U8 126 aa2.58□□□□□ -2
XRN1YGL173C MDM35O60200 86 aa2.58□□□□□ -2
XRN1YGL173C YHR125WP38831 101 aa2.58□□□□□ -2
XRN1YGL173C AIF1P52923 378 aa2.58□□□□□ -2
XRN1YGL173C LDB18Q07887 179 aa2.58□□□□□ -2
XRN1YGL173C BRR2P32639 2163 aaKnown RBP2.58□□□□□ -2
XRN1YGL173C YLR156WP0CE96 114 aa2.58□□□□□ -2
XRN1YGL173C YLR159WP0CE97 114 aa2.58□□□□□ -2
XRN1YGL173C YLR161WP0CE98 114 aa2.58□□□□□ -2
XRN1YGL173C YFR054CP43622 192 aa2.58□□□□□ -2
XRN1YGL173C FMN1Q03778 218 aa2.58□□□□□ -2
XRN1YGL173C YPR063CQ12160 140 aa2.58□□□□□ -2
XRN1YGL173C RPL2AP0CX45 254 aaKnown RBP2.58□□□□□ -2
XRN1YGL173C RPL2BP0CX46 254 aaKnown RBP2.58□□□□□ -2
XRN1YGL173C TRX3P25372 127 aa2.58□□□□□ -2
XRN1YGL173C VTC1P40046 129 aaRIP-Chip data2.58□□□□□ -2not detected
XRN1YGL173C NCA3P46955 337 aa2.58□□□□□ -2
XRN1YGL173C ATG40Q99325 256 aa2.58□□□□□ -2
XRN1YGL173C PHO13P19881 312 aa2.57□□□□□ -2
XRN1YGL173C RCN1P36054 211 aa2.57□□□□□ -2
XRN1YGL173C AST2P39945 430 aaKnown RBP2.57□□□□□ -2
XRN1YGL173C YGL118CP53132 145 aa2.57□□□□□ -2
XRN1YGL173C YAR068WP39564 161 aa2.57□□□□□ -2
XRN1YGL173C PGU1P47180 361 aa2.57□□□□□ -2
XRN1YGL173C YGL149WP53116 101 aa2.57□□□□□ -2
XRN1YGL173C MCH1Q07376 486 aa2.57□□□□□ -2
XRN1YGL173C RAD6P06104 172 aa2.57□□□□□ -2
XRN1YGL173C YBR209WP38311 105 aa2.57□□□□□ -2
XRN1YGL173C ERJ5P43613 295 aaPredicted RBP2.57□□□□□ -2
XRN1YGL173C FIP1P45976 327 aa2.57□□□□□ -2
XRN1YGL173C HHO1P53551 258 aa2.57□□□□□ -2
XRN1YGL173C COX10P21592 462 aa2.56□□□□□ -2
XRN1YGL173C RRT13P40042 185 aa2.56□□□□□ -2
XRN1YGL173C AYR1P40471 297 aa2.56□□□□□ -2
XRN1YGL173C SYM1Q06563 197 aa2.56□□□□□ -2
XRN1YGL173C YAL067W-AQ8TGK6 75 aa2.56□□□□□ -2
XRN1YGL173C MRPS9P38120 278 aa2.56□□□□□ -2
XRN1YGL173C RNH202Q05635 350 aa2.56□□□□□ -2
XRN1YGL173C PST1Q12355 444 aa2.56□□□□□ -2
XRN1YGL173C HYP2P23301 157 aaKnown RBP2.56□□□□□ -2
XRN1YGL173C YCL042WP25572 119 aa2.56□□□□□ -2
XRN1YGL173C GSP1P32835 219 aaKnown RBP2.56□□□□□ -2
XRN1YGL173C YHR022CP38763 256 aa2.56□□□□□ -2
XRN1YGL173C SPO73P40031 143 aa2.56□□□□□ -2
XRN1YGL173C YER135CP40082 130 aa2.56□□□□□ -2
XRN1YGL173C YKR005CQ02203 525 aa2.56□□□□□ -2
XRN1YGL173C ATO3Q12359 275 aa2.56□□□□□ -2
XRN1YGL173C YMR230W-AQ3E7B5 62 aa2.56□□□□□ -2
XRN1YGL173C TMA19P35691 167 aaKnown RBP2.55□□□□□ -2
XRN1YGL173C MID2P36027 376 aa2.55□□□□□ -2
XRN1YGL173C FLO5P38894 1075 aa2.55□□□□□ -2
XRN1YGL173C YCL001W-AP87012 153 aa2.55□□□□□ -2
XRN1YGL173C AIM11P87275 137 aa2.55□□□□□ -2
XRN1YGL173C YDR391CQ04170 232 aa2.55□□□□□ -2
XRN1YGL173C MIG1P27705 504 aa2.55□□□□□ -2
XRN1YGL173C TIR3P40552 269 aa2.55□□□□□ -2
XRN1YGL173C GPI2P46961 280 aa2.55□□□□□ -2
XRN1YGL173C CIS3P47001 227 aa2.55□□□□□ -2
XRN1YGL173C UBR1P19812 1950 aa2.55□□□□□ -2
XRN1YGL173C UTH1P36135 365 aa2.55□□□□□ -2
XRN1YGL173C RPS12P48589 143 aaKnown RBP2.55□□□□□ -2
XRN1YGL173C POP3P53833 195 aaPredicted RBP2.55□□□□□ -2
XRN1YGL173C YGL010WP25338 174 aa2.54□□□□□ -2
XRN1YGL173C SPC25P40014 221 aa2.54□□□□□ -2
XRN1YGL173C ECO1P43605 281 aa2.54□□□□□ -2
XRN1YGL173C ALG9P53868 555 aaKnown RBP2.54□□□□□ -2
XRN1YGL173C AIM36Q03798 255 aa2.54□□□□□ -2
XRN1YGL173C YEL028WP39989 153 aa2.54□□□□□ -2
XRN1YGL173C DML1Q03652 475 aa2.54□□□□□ -2
XRN1YGL173C ANT1Q06497 328 aa2.54□□□□□ -2
XRN1YGL173C SLD7Q08457 257 aa2.54□□□□□ -2
XRN1YGL173C YBL081WP38180 368 aaKnown RBP2.54□□□□□ -2
XRN1YGL173C EMC4P53073 190 aa2.54□□□□□ -2
XRN1YGL173C TMA23Q03525 211 aa2.54□□□□□ -2
XRN1YGL173C AHT1P29589 182 aa2.54□□□□□ -2
XRN1YGL173C CUP9P41817 306 aa2.54□□□□□ -2
XRN1YGL173C YJR015WP47090 510 aa2.54□□□□□ -2
XRN1YGL173C ERG25P53045 309 aa2.54□□□□□ -2
XRN1YGL173C MHF1Q3E835 90 aa2.54□□□□□ -2
XRN1YGL173C YFR032C-BQ8TGU2 87 aa2.54□□□□□ -2
XRN1YGL173C NUM1Q00402 2748 aa2.53□□□□□ -2
XRN1YGL173C SFK1P35735 353 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms