RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W MIG1P27705 504 aa2.04□□□□□ -2.08
SPF1YEL031W ELO1P39540 310 aa2.04□□□□□ -2.08
SPF1YEL031W SHR5P41912 237 aa2.04□□□□□ -2.08
SPF1YEL031W DUO1P53168 247 aaKnown RBP2.04□□□□□ -2.08
SPF1YEL031W YGR050CP53231 118 aa2.04□□□□□ -2.08
SPF1YEL031W SNP1Q00916 300 aaPredicted RBP2.04□□□□□ -2.08
SPF1YEL031W MRX11Q03079 207 aa2.04□□□□□ -2.08
SPF1YEL031W YLR111WQ12528 110 aa2.04□□□□□ -2.08
SPF1YEL031W YLR361C-AQ3E795 98 aa2.04□□□□□ -2.08
SPF1YEL031W RPL27AP0C2H6 136 aaKnown RBP2.03□□□□□ -2.08
SPF1YEL031W CPR2P23285 205 aa2.03□□□□□ -2.08
SPF1YEL031W GAR1P28007 205 aaKnown RBP2.03□□□□□ -2.08
SPF1YEL031W YNL217WP40152 326 aa2.03□□□□□ -2.08
SPF1YEL031W OSW5P40219 148 aa2.03□□□□□ -2.08
SPF1YEL031W YPL073CP40323 161 aa2.03□□□□□ -2.08
SPF1YEL031W GZF3P42944 551 aaKnown RBP2.03□□□□□ -2.08
SPF1YEL031W BRR6P53062 197 aa2.03□□□□□ -2.08
SPF1YEL031W CPD1P53314 239 aa2.03□□□□□ -2.08
SPF1YEL031W YNL184CP53876 108 aa2.03□□□□□ -2.08
SPF1YEL031W YLR422WQ06409 1932 aa2.03□□□□□ -2.08
SPF1YEL031W COX10P21592 462 aa2.03□□□□□ -2.08
SPF1YEL031W ERG4P25340 473 aa2.03□□□□□ -2.08
SPF1YEL031W RPS2P25443 254 aaKnown RBP2.03□□□□□ -2.08
SPF1YEL031W MCH2P36032 473 aa2.03□□□□□ -2.08
SPF1YEL031W YKR041WP36134 250 aa2.03□□□□□ -2.08
SPF1YEL031W TVP23P38962 199 aa2.03□□□□□ -2.08
SPF1YEL031W OXA1P39952 402 aa2.03□□□□□ -2.08
SPF1YEL031W YPI1P43587 155 aa2.03□□□□□ -2.08
SPF1YEL031W SBH2P52871 88 aa2.03□□□□□ -2.08
SPF1YEL031W YNR071CP53757 342 aa2.03□□□□□ -2.08
SPF1YEL031W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
SPF1YEL031W ISD11Q6Q560 94 aa2.03□□□□□ -2.08
SPF1YEL031W RPB8P20436 146 aa2.03□□□□□ -2.09
SPF1YEL031W MRPL20P22354 195 aaPredicted RBP2.03□□□□□ -2.09
SPF1YEL031W TOM40P23644 387 aaKnown RBP2.03□□□□□ -2.09
SPF1YEL031W RPA12P32529 125 aaKnown RBP2.03□□□□□ -2.09
SPF1YEL031W PAM17P36147 197 aa2.03□□□□□ -2.09
SPF1YEL031W YGP1P38616 354 aaKnown RBP2.03□□□□□ -2.09
SPF1YEL031W SDS23P53172 527 aa2.03□□□□□ -2.09
SPF1YEL031W BRP1P53194 125 aa2.03□□□□□ -2.09
SPF1YEL031W MET32Q12041 191 aa2.03□□□□□ -2.09
SPF1YEL031W POM34Q12445 299 aa2.03□□□□□ -2.09
SPF1YEL031W RPL23AP0CX41 137 aaKnown RBP2.02□□□□□ -2.09
SPF1YEL031W RPL23BP0CX42 137 aaKnown RBP2.02□□□□□ -2.09
SPF1YEL031W RPL35AP0CX84 120 aaKnown RBP2.02□□□□□ -2.09
SPF1YEL031W RPL35BP0CX85 120 aaKnown RBP2.02□□□□□ -2.09
SPF1YEL031W MTC7P32633 139 aa2.02□□□□□ -2.09
SPF1YEL031W YFR045WP43617 309 aa2.02□□□□□ -2.09
SPF1YEL031W BNA2P47125 453 aa2.02□□□□□ -2.09
SPF1YEL031W BOL1Q3E793 110 aa2.02□□□□□ -2.09
SPF1YEL031W YFL041W-AQ3E817 63 aa2.02□□□□□ -2.09
SPF1YEL031W YLL053CP0CD98 152 aa2.02□□□□□ -2.09
SPF1YEL031W ERG8P24521 451 aa2.02□□□□□ -2.09
SPF1YEL031W IMG2P25642 146 aaPredicted RBP2.02□□□□□ -2.09
SPF1YEL031W MRPS5P33759 307 aa2.02□□□□□ -2.09
SPF1YEL031W SRX1P36077 127 aa2.02□□□□□ -2.09
SPF1YEL031W YIP1P53039 248 aa2.02□□□□□ -2.09
SPF1YEL031W UBC7Q02159 165 aa2.02□□□□□ -2.09
SPF1YEL031W LEE1Q02799 301 aaKnown RBP2.02□□□□□ -2.09
SPF1YEL031W YDR042CQ03205 200 aa2.02□□□□□ -2.09
SPF1YEL031W RAV2Q03956 351 aa2.02□□□□□ -2.09
SPF1YEL031W RAF1Q06891 181 aa2.02□□□□□ -2.09
SPF1YEL031W DGA1Q08650 418 aa2.02□□□□□ -2.09
SPF1YEL031W YHR214C-EQ8TGK0 99 aa2.02□□□□□ -2.09
SPF1YEL031W YSF3P0C074 85 aaPredicted RBP2.02□□□□□ -2.09
SPF1YEL031W YBR121C-AP0C5L4 52 aa2.02□□□□□ -2.09
SPF1YEL031W YBR090CP38253 122 aa2.02□□□□□ -2.09
SPF1YEL031W SHO1P40073 367 aa2.02□□□□□ -2.09
SPF1YEL031W YIL163CP40448 117 aa2.02□□□□□ -2.09
SPF1YEL031W OYE3P41816 400 aaPredicted RBP2.02□□□□□ -2.09
SPF1YEL031W CUP9P41817 306 aa2.02□□□□□ -2.09
SPF1YEL031W YHM2Q04013 314 aa2.02□□□□□ -2.09
SPF1YEL031W LSM6Q06406 86 aaKnown RBP2.02□□□□□ -2.09
SPF1YEL031W YOS1Q3E834 85 aa2.02□□□□□ -2.09
SPF1YEL031W TAD3Q9URQ3 322 aa2.02□□□□□ -2.09
SPF1YEL031W PHD1P36093 366 aa2.01□□□□□ -2.09
SPF1YEL031W CAX4P53223 239 aa2.01□□□□□ -2.09
SPF1YEL031W IRC25Q07951 179 aa2.01□□□□□ -2.09
SPF1YEL031W FIT3Q08907 204 aa2.01□□□□□ -2.09
SPF1YEL031W MRP10O75012 95 aa2.01□□□□□ -2.09
SPF1YEL031W MRPL31P14063 131 aaPredicted RBP2.01□□□□□ -2.09
SPF1YEL031W SPC29P33419 253 aa2.01□□□□□ -2.09
SPF1YEL031W OM14P38325 134 aa2.01□□□□□ -2.09
SPF1YEL031W LYS1P38998 373 aaRIP-Chip data2.01□□□□□ -2.09not detected
SPF1YEL031W NCA3P46955 337 aa2.01□□□□□ -2.09
SPF1YEL031W DSK2P48510 373 aa2.01□□□□□ -2.09
SPF1YEL031W WSC2P53832 503 aa2.01□□□□□ -2.09
SPF1YEL031W COX12Q01519 83 aa2.01□□□□□ -2.09
SPF1YEL031W DIC1Q06143 298 aa2.01□□□□□ -2.09
SPF1YEL031W AYT1Q12226 474 aa2.01□□□□□ -2.09
SPF1YEL031W KTI11Q3E840 82 aa2.01□□□□□ -2.09
SPF1YEL031W YAL064W-BO13512 126 aa2□□□□□ -2.09
SPF1YEL031W ARF1P11076 181 aaKnown RBP2□□□□□ -2.09
SPF1YEL031W FPR1P20081 114 aaKnown RBP2□□□□□ -2.09
SPF1YEL031W ROX3P25046 220 aa2□□□□□ -2.09
SPF1YEL031W GPI18P38211 433 aa2□□□□□ -2.09
SPF1YEL031W CSH1P38287 376 aa2□□□□□ -2.09
SPF1YEL031W YIL059CP40520 121 aa2□□□□□ -2.09
SPF1YEL031W SWT21P53873 357 aaPredicted RBP2□□□□□ -2.09
SPF1YEL031W GRE1Q08969 168 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms