RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W HHT1P61830 136 aa0.82□□□□□ -2.28
SCC2YDR180W PAM18Q07914 168 aa0.82□□□□□ -2.28
SCC2YDR180W YMR316C-AI2HB70 103 aa0.81□□□□□ -2.28
SCC2YDR180W POX1P13711 748 aa0.81□□□□□ -2.28
SCC2YDR180W MDH2P22133 377 aa0.81□□□□□ -2.28
SCC2YDR180W QRI5P32344 111 aa0.81□□□□□ -2.28
SCC2YDR180W HOT13P36078 116 aa0.81□□□□□ -2.28
SCC2YDR180W GGC1P38988 300 aa0.81□□□□□ -2.28
SCC2YDR180W YNL208WP40159 199 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W MOG1P47123 218 aa0.81□□□□□ -2.28
SCC2YDR180W BOL2P53082 120 aa0.81□□□□□ -2.28
SCC2YDR180W YDR366CP87287 132 aa0.81□□□□□ -2.28
SCC2YDR180W RPL21AQ02753 160 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W ELC1Q03071 99 aa0.81□□□□□ -2.28
SCC2YDR180W VPS71Q03433 280 aa0.81□□□□□ -2.28
SCC2YDR180W PKR1Q03880 122 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W THI74Q04083 370 aa0.81□□□□□ -2.28
SCC2YDR180W RPL21BQ12672 160 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W RAS2P01120 322 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W VAR1P02381 398 aa0.81□□□□□ -2.28
SCC2YDR180W URA5P13298 226 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W SPS18P32572 300 aa0.81□□□□□ -2.28
SCC2YDR180W OM14P38325 134 aa0.81□□□□□ -2.28
SCC2YDR180W THG1P53215 237 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W MRPS12P53732 153 aa0.81□□□□□ -2.28
SCC2YDR180W PGA1P53896 198 aa0.81□□□□□ -2.28
SCC2YDR180W MIX14Q04341 121 aa0.81□□□□□ -2.28
SCC2YDR180W YPL264CQ08980 353 aa0.81□□□□□ -2.28
SCC2YDR180W YDL211CQ12121 372 aa0.81□□□□□ -2.28
SCC2YDR180W YLR099W-AQ3E798 87 aa0.81□□□□□ -2.28
SCC2YDR180W YBL112CQ3E7Y4 105 aa0.81□□□□□ -2.28
SCC2YDR180W KSH1Q8TGJ3 72 aa0.81□□□□□ -2.28
SCC2YDR180W RPL20AP0CX23 172 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W RPL20BP0CX24 172 aaPredicted RBP0.81□□□□□ -2.28
SCC2YDR180W ARF2P19146 181 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W MAG1P22134 296 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W ASK1P35734 292 aa0.81□□□□□ -2.28
SCC2YDR180W SHE2P36068 246 aaKnown RBP RIP-Chip data0.81□□□□□ -2.28not detected
SCC2YDR180W CSH1P38287 376 aa0.81□□□□□ -2.28
SCC2YDR180W YGP1P38616 354 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W SHO1P40073 367 aa0.81□□□□□ -2.28
SCC2YDR180W TIF34P40217 347 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W YPL073CP40323 161 aa0.81□□□□□ -2.28
SCC2YDR180W FMC1P40491 155 aa0.81□□□□□ -2.28
SCC2YDR180W YIA6P40556 373 aa0.81□□□□□ -2.28
SCC2YDR180W YFL065CP43539 102 aa0.81□□□□□ -2.28
SCC2YDR180W SFH5P47008 294 aa0.81□□□□□ -2.28
SCC2YDR180W CDH1P53197 566 aa0.81□□□□□ -2.28
SCC2YDR180W YGR164WP53291 111 aa0.81□□□□□ -2.28
SCC2YDR180W MRX8Q05473 314 aa0.81□□□□□ -2.28
SCC2YDR180W GRX8Q05926 109 aa0.81□□□□□ -2.28
SCC2YDR180W TIM18Q08749 192 aa0.81□□□□□ -2.28
SCC2YDR180W YPR203WQ08994 102 aa0.81□□□□□ -2.28
SCC2YDR180W ATG40Q99325 256 aa0.81□□□□□ -2.28
SCC2YDR180W BEM2P39960 2167 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W ADK1P07170 222 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W RPS8AP0CX39 200 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W RPS8BP0CX40 200 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W PRP18P33411 251 aaPredicted RBP0.81□□□□□ -2.28
SCC2YDR180W TIR2P33890 251 aa0.81□□□□□ -2.28
SCC2YDR180W YKR041WP36134 250 aa0.81□□□□□ -2.28
SCC2YDR180W PHO88P38264 188 aaPredicted RBP0.81□□□□□ -2.28
SCC2YDR180W ARC40P38328 384 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W YHL037CP38733 133 aa0.81□□□□□ -2.28
SCC2YDR180W YHR138CP38841 114 aaPredicted RBP0.81□□□□□ -2.28
SCC2YDR180W PEX22P39718 180 aa0.81□□□□□ -2.28
SCC2YDR180W VTC1P40046 129 aaRIP-Chip data0.81□□□□□ -2.28not detected
SCC2YDR180W SPI1P40092 148 aa0.81□□□□□ -2.28
SCC2YDR180W KEG1P43614 200 aa0.81□□□□□ -2.28
SCC2YDR180W GPI2P46961 280 aa0.81□□□□□ -2.28
SCC2YDR180W YGL262WP53054 175 aa0.81□□□□□ -2.28
SCC2YDR180W PAU4P53427 120 aa0.81□□□□□ -2.28
SCC2YDR180W YNL140CP53910 189 aa0.81□□□□□ -2.28
SCC2YDR180W YDR042CQ03205 200 aa0.81□□□□□ -2.28
SCC2YDR180W HNT1Q04344 158 aaKnown RBP0.81□□□□□ -2.28
SCC2YDR180W FIT3Q08907 204 aa0.81□□□□□ -2.28
SCC2YDR180W FOL3Q12676 427 aaPredicted RBP0.81□□□□□ -2.28
SCC2YDR180W YLR412C-AQ3E742 68 aa0.81□□□□□ -2.28
SCC2YDR180W YCR007CP25354 239 aa0.8□□□□□ -2.28
SCC2YDR180W TOA2P32774 122 aa0.8□□□□□ -2.28
SCC2YDR180W YHR127WP38833 243 aaKnown RBP0.8□□□□□ -2.28
SCC2YDR180W MRPL49P40858 161 aaPredicted RBP0.8□□□□□ -2.28
SCC2YDR180W OST1P41543 476 aaKnown RBP0.8□□□□□ -2.28
SCC2YDR180W HAC1P41546 238 aa0.8□□□□□ -2.28
SCC2YDR180W PGU1P47180 361 aa0.8□□□□□ -2.28
SCC2YDR180W MIC27P50945 234 aa0.8□□□□□ -2.28
SCC2YDR180W YNR048WP53740 393 aa0.8□□□□□ -2.28
SCC2YDR180W MCH1Q07376 486 aa0.8□□□□□ -2.28
SCC2YDR180W YOL024WQ08172 172 aa0.8□□□□□ -2.28
SCC2YDR180W ZEO1Q08245 113 aa0.8□□□□□ -2.28
SCC2YDR180W YOR292CQ08743 309 aa0.8□□□□□ -2.28
SCC2YDR180W BLM10P43583 2143 aa0.8□□□□□ -2.28
SCC2YDR180W SOD1P00445 154 aaKnown RBP0.8□□□□□ -2.28
SCC2YDR180W MRS1P07266 363 aa0.8□□□□□ -2.28
SCC2YDR180W SEC4P07560 215 aaKnown RBP0.8□□□□□ -2.28
SCC2YDR180W TOM40P23644 387 aaKnown RBP0.8□□□□□ -2.28
SCC2YDR180W SPT4P32914 102 aaPredicted RBP0.8□□□□□ -2.28
SCC2YDR180W DOG2P38773 246 aa0.8□□□□□ -2.28
SCC2YDR180W NOC4Q06512 552 aaPredicted RBP0.8□□□□□ -2.28
SCC2YDR180W YOL118CQ08259 102 aa0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms