RNA–Protein interactions for RNA: YDL132W

CDC53, Transcript of Cullin, yeastyeast

Gene CDC53, Length 2,448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC53YDL132W YLR422WQ06409 1932 aa1.32□□□□□ -2.2
CDC53YDL132W YLR236CA0A023PZG4 107 aa1.32□□□□□ -2.2
CDC53YDL132W RAD6P06104 172 aa1.32□□□□□ -2.2
CDC53YDL132W SCL1P21243 252 aaKnown RBP1.32□□□□□ -2.2
CDC53YDL132W HSP30P25619 332 aa1.32□□□□□ -2.2
CDC53YDL132W UTR5P32630 166 aa1.32□□□□□ -2.2
CDC53YDL132W YBR220CP38318 560 aa1.32□□□□□ -2.2
CDC53YDL132W GLR1P41921 483 aaKnown RBP1.32□□□□□ -2.2
CDC53YDL132W YGR201CP42936 225 aa1.32□□□□□ -2.2
CDC53YDL132W YGR042WP53227 271 aa1.32□□□□□ -2.2
CDC53YDL132W SAY1P53324 424 aa1.32□□□□□ -2.2
CDC53YDL132W HRD1Q08109 551 aa1.32□□□□□ -2.2
CDC53YDL132W MSB2P32334 1306 aa1.32□□□□□ -2.2
CDC53YDL132W ATP5P09457 212 aa1.31□□□□□ -2.2
CDC53YDL132W MOG1P47123 218 aa1.31□□□□□ -2.2
CDC53YDL132W YDR391CQ04170 232 aa1.31□□□□□ -2.2
CDC53YDL132W RAD28Q12021 506 aa1.31□□□□□ -2.2
CDC53YDL132W SEN1Q00416 2231 aaKnown RBP1.31□□□□□ -2.2
CDC53YDL132W UBC8P28263 218 aa1.31□□□□□ -2.2
CDC53YDL132W NUF2P33895 451 aa1.31□□□□□ -2.2
CDC53YDL132W DLS1P40366 167 aa1.31□□□□□ -2.2
CDC53YDL132W YFR054CP43622 192 aa1.31□□□□□ -2.2
CDC53YDL132W YNL033WP53964 284 aa1.31□□□□□ -2.2
CDC53YDL132W PIR1Q03178 341 aa1.31□□□□□ -2.2
CDC53YDL132W CUE4Q04201 117 aaPredicted RBP1.31□□□□□ -2.2
CDC53YDL132W LYS2P07702 1392 aa1.31□□□□□ -2.2
CDC53YDL132W YBR209WP38311 105 aa1.3□□□□□ -2.2
CDC53YDL132W FYV4P38783 130 aaPredicted RBP1.3□□□□□ -2.2
CDC53YDL132W YEL028WP39989 153 aa1.3□□□□□ -2.2
CDC53YDL132W YPL073CP40323 161 aa1.3□□□□□ -2.2
CDC53YDL132W SYM1Q06563 197 aa1.3□□□□□ -2.2
CDC53YDL132W FIP1P45976 327 aa1.3□□□□□ -2.2
CDC53YDL132W YPR174CQ06616 221 aaPredicted RBP1.3□□□□□ -2.2
CDC53YDL132W ATP20Q12233 115 aa1.3□□□□□ -2.2
CDC53YDL132W YHR086W-AQ3E746 53 aa1.3□□□□□ -2.2
CDC53YDL132W ACC1Q00955 2233 aaKnown RBP1.3□□□□□ -2.2
CDC53YDL132W FLO9P39712 1322 aa1.3□□□□□ -2.2
CDC53YDL132W SHE2P36068 246 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
CDC53YDL132W GAA1P39012 614 aa1.29□□□□□ -2.2
CDC53YDL132W DAN1P47178 298 aa1.29□□□□□ -2.2
CDC53YDL132W GRX5Q02784 150 aa1.29□□□□□ -2.2
CDC53YDL132W RIM9Q04734 239 aa1.29□□□□□ -2.2
CDC53YDL132W RIB3Q99258 208 aa1.29□□□□□ -2.2
CDC53YDL132W RRT1P38192 103 aa1.29□□□□□ -2.2
CDC53YDL132W HTD2P38790 280 aaKnown RBP1.29□□□□□ -2.2
CDC53YDL132W HHO1P53551 258 aa1.29□□□□□ -2.2
CDC53YDL132W SML1Q04964 104 aa1.29□□□□□ -2.2
CDC53YDL132W YPR013CQ12145 317 aa1.29□□□□□ -2.2
CDC53YDL132W ECM29P38737 1868 aa1.28□□□□□ -2.2
CDC53YDL132W GSP2P32836 220 aaKnown RBP1.28□□□□□ -2.2
CDC53YDL132W DSE2P38844 325 aa1.28□□□□□ -2.2
CDC53YDL132W CCC1P47818 322 aa1.28□□□□□ -2.2
CDC53YDL132W DAD3P69850 94 aa1.28□□□□□ -2.2
CDC53YDL132W UPS3Q04006 179 aa1.28□□□□□ -2.2
CDC53YDL132W CSF1Q12150 2958 aa1.28□□□□□ -2.2
CDC53YDL132W TRA1P38811 3744 aa1.28□□□□□ -2.2
CDC53YDL132W TFC1P32367 649 aa1.28□□□□□ -2.2
CDC53YDL132W YJL218WP40892 196 aaKnown RBP1.28□□□□□ -2.2
CDC53YDL132W KNH1P50112 268 aa1.28□□□□□ -2.2
CDC53YDL132W LIP1Q03579 150 aa1.28□□□□□ -2.2
CDC53YDL132W FLO1P32768 1537 aa1.27□□□□□ -2.21
CDC53YDL132W DDI2P0CH63 225 aa1.27□□□□□ -2.21
CDC53YDL132W DDI3P0CH64 225 aa1.27□□□□□ -2.21
CDC53YDL132W SEC11P15367 167 aa1.27□□□□□ -2.21
CDC53YDL132W SPT14P32363 452 aa1.27□□□□□ -2.21
CDC53YDL132W SVP26P38869 228 aa1.27□□□□□ -2.21
CDC53YDL132W RBL2P48606 106 aaKnown RBP1.27□□□□□ -2.21
CDC53YDL132W PRP11Q07350 266 aaPredicted RBP1.27□□□□□ -2.21
CDC53YDL132W UIP4Q08926 304 aa1.27□□□□□ -2.21
CDC53YDL132W YDR034W-BQ6Q5X2 51 aa1.27□□□□□ -2.21
CDC53YDL132W BEM2P39960 2167 aaKnown RBP1.27□□□□□ -2.21
CDC53YDL132W UBR2Q07963 1872 aa1.27□□□□□ -2.21
CDC53YDL132W PHO13P19881 312 aa1.27□□□□□ -2.21
CDC53YDL132W SRP21P32342 167 aa1.27□□□□□ -2.21
CDC53YDL132W YNL200CP40165 246 aaKnown RBP1.27□□□□□ -2.21
CDC53YDL132W MOB1P40484 314 aa1.27□□□□□ -2.21
CDC53YDL132W GPI2P46961 280 aa1.27□□□□□ -2.21
CDC53YDL132W YNR064CP53750 290 aa1.27□□□□□ -2.21
CDC53YDL132W YDR278CQ05612 105 aa1.27□□□□□ -2.21
CDC53YDL132W YPD1Q07688 167 aa1.27□□□□□ -2.21
CDC53YDL132W YLR361C-AQ3E795 98 aa1.27□□□□□ -2.21
CDC53YDL132W PHB1P40961 287 aa1.26□□□□□ -2.21
CDC53YDL132W CGI121Q03705 181 aaKnown RBP1.26□□□□□ -2.21
CDC53YDL132W PST2Q12335 198 aaKnown RBP1.26□□□□□ -2.21
CDC53YDL132W COX8P04039 78 aa1.26□□□□□ -2.21
CDC53YDL132W MDH2P22133 377 aa1.26□□□□□ -2.21
CDC53YDL132W SUI1P32911 108 aaKnown RBP1.26□□□□□ -2.21
CDC53YDL132W YER181CP40097 107 aa1.26□□□□□ -2.21
CDC53YDL132W YDR366CP87287 132 aa1.26□□□□□ -2.21
CDC53YDL132W UBC7Q02159 165 aa1.26□□□□□ -2.21
CDC53YDL132W ANT1Q06497 328 aa1.26□□□□□ -2.21
CDC53YDL132W RFU1Q08003 200 aa1.26□□□□□ -2.21
CDC53YDL132W SPC3Q12133 184 aa1.26□□□□□ -2.21
CDC53YDL132W UBR1P19812 1950 aa1.26□□□□□ -2.21
CDC53YDL132W GCN1P33892 2672 aaKnown RBP1.26□□□□□ -2.21
CDC53YDL132W MOT1P32333 1867 aa1.25□□□□□ -2.21
CDC53YDL132W MYO1P08964 1928 aa1.25□□□□□ -2.21
CDC53YDL132W SUA7P29055 345 aaPredicted RBP1.25□□□□□ -2.21
CDC53YDL132W YHL018WP38744 120 aaPredicted RBP1.25□□□□□ -2.21
CDC53YDL132W VMA22P38784 181 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms