RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C YLR236CA0A023PZG4 107 aa1.53□□□□□ -2.16
PRP6YBR055C SCL1P21243 252 aaKnown RBP1.53□□□□□ -2.16
PRP6YBR055C HSP30P25619 332 aa1.53□□□□□ -2.16
PRP6YBR055C AGE2P40529 298 aa1.53□□□□□ -2.16
PRP6YBR055C CCC1P47818 322 aa1.53□□□□□ -2.16
PRP6YBR055C YNL033WP53964 284 aa1.53□□□□□ -2.16
PRP6YBR055C EMC6Q12431 108 aa1.53□□□□□ -2.16
PRP6YBR055C YEL028WP39989 153 aa1.53□□□□□ -2.17
PRP6YBR055C PHB1P40961 287 aa1.53□□□□□ -2.17
PRP6YBR055C CYT2Q00873 224 aa1.53□□□□□ -2.17
PRP6YBR055C YLR361C-AQ3E795 98 aa1.53□□□□□ -2.17
PRP6YBR055C UBR2Q07963 1872 aa1.52□□□□□ -2.17
PRP6YBR055C RRT1P38192 103 aa1.52□□□□□ -2.17
PRP6YBR055C HTD2P38790 280 aaKnown RBP1.52□□□□□ -2.17
PRP6YBR055C YER135CP40082 130 aa1.52□□□□□ -2.17
PRP6YBR055C RIO2P40160 425 aaKnown RBP1.52□□□□□ -2.17
PRP6YBR055C ERG25P53045 309 aa1.52□□□□□ -2.17
PRP6YBR055C SYM1Q06563 197 aa1.52□□□□□ -2.17
PRP6YBR055C PST2Q12335 198 aaKnown RBP1.52□□□□□ -2.17
PRP6YBR055C SPT14P32363 452 aa1.52□□□□□ -2.17
PRP6YBR055C YBR209WP38311 105 aa1.52□□□□□ -2.17
PRP6YBR055C YHR022CP38763 256 aa1.52□□□□□ -2.17
PRP6YBR055C UBC7Q02159 165 aa1.52□□□□□ -2.17
PRP6YBR055C CSN9Q03981 162 aa1.52□□□□□ -2.17
PRP6YBR055C RFU1Q08003 200 aa1.52□□□□□ -2.17
PRP6YBR055C HRT1Q08273 121 aa1.52□□□□□ -2.17
PRP6YBR055C YLR422WQ06409 1932 aa1.51□□□□□ -2.17
PRP6YBR055C RAS2P01120 322 aaKnown RBP1.51□□□□□ -2.17
PRP6YBR055C YER181CP40097 107 aa1.51□□□□□ -2.17
PRP6YBR055C YJL218WP40892 196 aaKnown RBP1.51□□□□□ -2.17
PRP6YBR055C YDR391CQ04170 232 aa1.51□□□□□ -2.17
PRP6YBR055C CUE4Q04201 117 aaPredicted RBP1.51□□□□□ -2.17
PRP6YBR055C HRD1Q08109 551 aa1.51□□□□□ -2.17
PRP6YBR055C RAD28Q12021 506 aa1.51□□□□□ -2.17
PRP6YBR055C COF1Q03048 143 aaKnown RBP1.51□□□□□ -2.17
PRP6YBR055C PHO13P19881 312 aa1.5□□□□□ -2.17
PRP6YBR055C SUA7P29055 345 aaPredicted RBP1.5□□□□□ -2.17
PRP6YBR055C SVP26P38869 228 aa1.5□□□□□ -2.17
PRP6YBR055C HHO1P53551 258 aa1.5□□□□□ -2.17
PRP6YBR055C DAD3P69850 94 aa1.5□□□□□ -2.17
PRP6YBR055C RIM9Q04734 239 aa1.5□□□□□ -2.17
PRP6YBR055C YPD1Q07688 167 aa1.5□□□□□ -2.17
PRP6YBR055C MRPL24P36525 258 aaPredicted RBP1.5□□□□□ -2.17
PRP6YBR055C VMA22P38784 181 aa1.5□□□□□ -2.17
PRP6YBR055C GAA1P39012 614 aa1.5□□□□□ -2.17
PRP6YBR055C SAY1P53324 424 aa1.5□□□□□ -2.17
PRP6YBR055C YDR366CP87287 132 aa1.5□□□□□ -2.17
PRP6YBR055C PIR1Q03178 341 aa1.5□□□□□ -2.17
PRP6YBR055C FMN1Q03778 218 aa1.5□□□□□ -2.17
PRP6YBR055C YPR013CQ12145 317 aa1.5□□□□□ -2.17
PRP6YBR055C MSB2P32334 1306 aa1.49□□□□□ -2.17
PRP6YBR055C PHO85P17157 305 aa1.49□□□□□ -2.17
PRP6YBR055C PRS3P38689 320 aaKnown RBP1.49□□□□□ -2.17
PRP6YBR055C GPI2P46961 280 aa1.49□□□□□ -2.17
PRP6YBR055C KNH1P50112 268 aa1.49□□□□□ -2.17
PRP6YBR055C LIP1Q03579 150 aa1.49□□□□□ -2.17
PRP6YBR055C YDR278CQ05612 105 aa1.49□□□□□ -2.17
PRP6YBR055C RNH202Q05635 350 aa1.49□□□□□ -2.17
PRP6YBR055C FAB1P34756 2278 aa1.49□□□□□ -2.17
PRP6YBR055C DDI2P0CH63 225 aa1.49□□□□□ -2.17
PRP6YBR055C DDI3P0CH64 225 aa1.49□□□□□ -2.17
PRP6YBR055C NHP6AP11632 93 aaKnown RBP1.49□□□□□ -2.17
PRP6YBR055C UTR5P32630 166 aa1.49□□□□□ -2.17
PRP6YBR055C YEL073CP39974 107 aa1.49□□□□□ -2.17
PRP6YBR055C YNR064CP53750 290 aa1.49□□□□□ -2.17
PRP6YBR055C DYN2Q02647 92 aa1.49□□□□□ -2.17
PRP6YBR055C SEC11P15367 167 aa1.48□□□□□ -2.17
PRP6YBR055C SRP21P32342 167 aa1.48□□□□□ -2.17
PRP6YBR055C DAN1P47178 298 aa1.48□□□□□ -2.17
PRP6YBR055C GRX5Q02784 150 aa1.48□□□□□ -2.17
PRP6YBR055C EST3Q03096 181 aa1.48□□□□□ -2.17
PRP6YBR055C YPR174CQ06616 221 aaPredicted RBP1.48□□□□□ -2.17
PRP6YBR055C PRP11Q07350 266 aaPredicted RBP1.48□□□□□ -2.17
PRP6YBR055C YOR381W-AQ3E804 55 aa1.48□□□□□ -2.17
PRP6YBR055C TFC1P32367 649 aa1.48□□□□□ -2.17
PRP6YBR055C YGR039WP53225 103 aa1.48□□□□□ -2.17
PRP6YBR055C SML1Q04964 104 aa1.48□□□□□ -2.17
PRP6YBR055C SPC3Q12133 184 aa1.48□□□□□ -2.17
PRP6YBR055C MOT1P32333 1867 aa1.48□□□□□ -2.17
PRP6YBR055C NOP1P15646 327 aaKnown RBP1.47□□□□□ -2.17
PRP6YBR055C GSP2P32836 220 aaKnown RBP1.47□□□□□ -2.17
PRP6YBR055C SUI1P32911 108 aaKnown RBP1.47□□□□□ -2.17
PRP6YBR055C POP3P53833 195 aaPredicted RBP1.47□□□□□ -2.17
PRP6YBR055C RGM1Q00453 211 aa1.47□□□□□ -2.17
PRP6YBR055C YDR102CQ03864 110 aa1.47□□□□□ -2.17
PRP6YBR055C UPS3Q04006 179 aa1.47□□□□□ -2.17
PRP6YBR055C ECM29P38737 1868 aa1.47□□□□□ -2.17
PRP6YBR055C YHL018WP38744 120 aaPredicted RBP1.47□□□□□ -2.17
PRP6YBR055C TIM8P57744 87 aa1.47□□□□□ -2.17
PRP6YBR055C CGI121Q03705 181 aaKnown RBP1.47□□□□□ -2.17
PRP6YBR055C UIP4Q08926 304 aa1.47□□□□□ -2.17
PRP6YBR055C FCY1Q12178 158 aa1.47□□□□□ -2.17
PRP6YBR055C CUP1-1P0CX80 61 aa1.46□□□□□ -2.17
PRP6YBR055C CUP1-2P0CX81 61 aa1.46□□□□□ -2.17
PRP6YBR055C RPS20P38701 121 aaKnown RBP1.46□□□□□ -2.17
PRP6YBR055C YHR140WP38842 239 aa1.46□□□□□ -2.17
PRP6YBR055C DSE2P38844 325 aa1.46□□□□□ -2.17
PRP6YBR055C DML1Q03652 475 aa1.46□□□□□ -2.17
PRP6YBR055C UPS1Q05776 175 aa1.46□□□□□ -2.17
PRP6YBR055C ATG41Q12048 136 aa1.46□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 104.8 ms