RNA–Protein interactions for RNA: ENST00000584992.1

RIOK3-211, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 396 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-211ENST00000584992 VIPR2P41587 438 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 PIK3CBP42338 1070 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 PXNP49023 591 aaPredicted RBP4.89□□□□□ -1.63
RIOK3-211ENST00000584992 NEK3P51956 506 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 PICALMQ13492 652 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 HLXQ14774 488 aaPredicted RBP4.89□□□□□ -1.63
RIOK3-211ENST00000584992 SF3B3Q15393 1217 aaKnown RBP4.89□□□□□ -1.63
RIOK3-211ENST00000584992 RBM20Q5T481 1227 aaKnown RBP4.89□□□□□ -1.63
RIOK3-211ENST00000584992 ABHD17BQ5VST6 288 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 B3GALNT2Q8NCR0 500 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 OR56A3Q8NH54 315 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 SLC30A5Q8TAD4 765 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 PARD3BQ8TEW8 1205 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 LARP4BQ92615 738 aaKnown RBP4.89□□□□□ -1.63
RIOK3-211ENST00000584992 NMD3Q96D46 503 aaKnown RBP4.89□□□□□ -1.63
RIOK3-211ENST00000584992 Q96MF0 132 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 NAA15Q9BXJ9 866 aaKnown RBP4.89□□□□□ -1.63
RIOK3-211ENST00000584992 STK31Q9BXU1 1019 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 CYP4F11Q9HBI6 524 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 A1CFQ9NQ94 594 aaKnown RBP4.89□□□□□ -1.63
RIOK3-211ENST00000584992 COL20A1Q9P218 1284 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 SHOC2Q9UQ13 582 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 TBC1D30Q9Y2I9 924 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 SPATA31A3Q5VYP0 1347 aa4.89□□□□□ -1.63
RIOK3-211ENST00000584992 PYCARD-AS1I3L0S3 204 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 RASSF9O75901 435 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 FSHBP01225 129 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 EGR2P11161 476 aaPredicted RBP4.88□□□□□ -1.63
RIOK3-211ENST00000584992 CYP2C9P11712 490 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 XRCC6P12956 609 aaKnown RBP eCLIP4.88□□□□□ -1.63
RIOK3-211ENST00000584992 PPP3CBP16298 524 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 RPL17P18621 184 aaKnown RBP4.88□□□□□ -1.63
RIOK3-211ENST00000584992 LOXL3P58215 753 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 SATB1Q01826 763 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 KRT17Q04695 432 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 IFIT5Q13325 482 aaKnown RBP4.88□□□□□ -1.63
RIOK3-211ENST00000584992 LONRF1Q17RB8 773 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 VPS53Q5VIR6 699 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 TSHZ1Q6ZSZ6 1077 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 USP51Q70EK9 711 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 ZNF627Q7L945 461 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 MICU3Q86XE3 530 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 SLC44A3Q8N4M1 653 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.88□□□□□ -1.63
RIOK3-211ENST00000584992 TOR1AIP2Q8NFQ8 470 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 LPIN2Q92539 896 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 FUBP1Q96AE4 644 aaKnown RBP4.88□□□□□ -1.63
RIOK3-211ENST00000584992 AIFM2Q9BRQ8 373 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 TPSD1Q9BZJ3 242 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 PNPLA8Q9NP80 782 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 ZSCAN32Q9NX65 697 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 HDAC9Q9UKV0 1011 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 DMTF1Q9Y222 760 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 PAXBP1Q9Y5B6 917 aa4.88□□□□□ -1.63
RIOK3-211ENST00000584992 CCDC194A0A1B0GVG4 234 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 MBD3L4A6NDZ8 208 aaPredicted RBP4.87□□□□□ -1.63
RIOK3-211ENST00000584992 MBD3L3A6NE82 208 aaPredicted RBP4.87□□□□□ -1.63
RIOK3-211ENST00000584992 F8W8V4 182 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 hCG_1984214I3L0E3 225 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 HKR1P10072 659 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 KLRC1P26715 233 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 PRIM2P49643 509 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 WNT3P56703 355 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 PLA1AQ53H76 456 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 ARHGAP40Q5TG30 622 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 ZDHHC24Q6UX98 284 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 ZNF280BQ86YH2 543 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 LIX1LQ8IVB5 337 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 CCDC33Q8N5R6 958 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 CAVIN3Q969G5 261 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 SPSB4Q96A44 273 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 OSBPL9Q96SU4 736 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 MESP1Q9BRJ9 268 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 PTDSS2Q9BVG9 487 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 ACTRT3Q9BYD9 372 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 UNKQ9C0B0 810 aaKnown RBP4.87□□□□□ -1.63
RIOK3-211ENST00000584992 AMBRA1Q9C0C7 1298 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 KCTD5Q9NXV2 234 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 ITGB1BP2Q9UKP3 347 aa4.87□□□□□ -1.63
RIOK3-211ENST00000584992 MRPS17Q9Y2R5 130 aaKnown RBP4.87□□□□□ -1.63
RIOK3-211ENST00000584992 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.87□□□□□ -1.63
RIOK3-211ENST00000584992 POM121BA6NF01 834 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 FOXN3O00409 490 aaPredicted RBP4.86□□□□□ -1.63
RIOK3-211ENST00000584992 PEX1O43933 1283 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 PARP1P09874 1014 aaKnown RBP4.86□□□□□ -1.63
RIOK3-211ENST00000584992 SRGNP10124 158 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 HNRNPMP52272 730 aaKnown RBP eCLIP4.86□□□□□ -1.63
RIOK3-211ENST00000584992 BLOC1S1P78537 153 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 ZNF543Q08ER8 600 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 DAG1Q14118 895 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 MGAT5BQ3V5L5 792 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 SYCP2LQ5T4T6 812 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 RGS7BPQ6MZT1 257 aaPredicted RBP4.86□□□□□ -1.63
RIOK3-211ENST00000584992 VWA1Q6PCB0 445 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 Q6YL49 198 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 UNC13DQ70J99 1090 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 C11orf96Q7Z7L8 435 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 LNX2Q8N448 690 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 BEND2Q8NDZ0 799 aa4.86□□□□□ -1.63
RIOK3-211ENST00000584992 SUPT20HQ8NEM7 779 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms