RNA–Protein interactions for RNA: ENST00000584992.1

RIOK3-211, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 396 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-211ENST00000584992 AEBP2Q6ZN18 517 aaPredicted RBP20.13■□□□□ 0.81
RIOK3-211ENST00000584992 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
RIOK3-211ENST00000584992 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
RIOK3-211ENST00000584992 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
RIOK3-211ENST00000584992 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
RIOK3-211ENST00000584992 FOXD1Q16676 465 aa15.82■□□□□ 0.12
RIOK3-211ENST00000584992 ADRA2BP18089 450 aa15.36■□□□□ 0.05
RIOK3-211ENST00000584992 PPP6R1Q9UPN7 881 aa15.34■□□□□ 0.05
RIOK3-211ENST00000584992 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
RIOK3-211ENST00000584992 MSH5O43196 834 aa14.51□□□□□ -0.09
RIOK3-211ENST00000584992 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
RIOK3-211ENST00000584992 KCNA4P22459 653 aa14.12□□□□□ -0.15
RIOK3-211ENST00000584992 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
RIOK3-211ENST00000584992 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
RIOK3-211ENST00000584992 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
RIOK3-211ENST00000584992 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
RIOK3-211ENST00000584992 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
RIOK3-211ENST00000584992 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
RIOK3-211ENST00000584992 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
RIOK3-211ENST00000584992 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
RIOK3-211ENST00000584992 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
RIOK3-211ENST00000584992 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
RIOK3-211ENST00000584992 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
RIOK3-211ENST00000584992 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
RIOK3-211ENST00000584992 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
RIOK3-211ENST00000584992 ZBTB22O15209 634 aa12.99□□□□□ -0.33
RIOK3-211ENST00000584992 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
RIOK3-211ENST00000584992 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
RIOK3-211ENST00000584992 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
RIOK3-211ENST00000584992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.363e-9■□□□□ 9.6
RIOK3-211ENST00000584992 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
RIOK3-211ENST00000584992 U3KPZ7 1027 aaPredicted RBP12.62□□□□□ -0.39
RIOK3-211ENST00000584992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
RIOK3-211ENST00000584992 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
RIOK3-211ENST00000584992 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
RIOK3-211ENST00000584992 RNF39Q9H2S5 420 aa12.45□□□□□ -0.42
RIOK3-211ENST00000584992 ATXN8OSP0DMR3 200 aa12.44□□□□□ -0.42
RIOK3-211ENST00000584992 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
RIOK3-211ENST00000584992 APLP2Q06481 763 aa12.33□□□□□ -0.44
RIOK3-211ENST00000584992 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
RIOK3-211ENST00000584992 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
RIOK3-211ENST00000584992 CAPN15O75808 1086 aa12.19□□□□□ -0.46
RIOK3-211ENST00000584992 TRHP20396 242 aaPredicted RBP12.18□□□□□ -0.46
RIOK3-211ENST00000584992 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
RIOK3-211ENST00000584992 CACNB1Q02641 598 aaPredicted RBP12.06□□□□□ -0.48
RIOK3-211ENST00000584992 ABCB7O75027 752 aa11.99□□□□□ -0.49
RIOK3-211ENST00000584992 POLA2Q14181 598 aa11.99□□□□□ -0.49
RIOK3-211ENST00000584992 DSG3P32926 999 aa11.9□□□□□ -0.5
RIOK3-211ENST00000584992 FBLN2P98095 1184 aa11.82□□□□□ -0.52
RIOK3-211ENST00000584992 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
RIOK3-211ENST00000584992 FKBP8Q14318 412 aa11.81□□□□□ -0.52
RIOK3-211ENST00000584992 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
RIOK3-211ENST00000584992 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
RIOK3-211ENST00000584992 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
RIOK3-211ENST00000584992 ZNF692Q9BU19 519 aaPredicted RBP11.48□□□□□ -0.57
RIOK3-211ENST00000584992 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
RIOK3-211ENST00000584992 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
RIOK3-211ENST00000584992 SPDYE2Q495Y8 402 aa11.47□□□□□ -0.57
RIOK3-211ENST00000584992 PROM2Q8N271 834 aa11.4□□□□□ -0.58
RIOK3-211ENST00000584992 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
RIOK3-211ENST00000584992 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
RIOK3-211ENST00000584992 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
RIOK3-211ENST00000584992 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
RIOK3-211ENST00000584992 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
RIOK3-211ENST00000584992 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
RIOK3-211ENST00000584992 STAG3Q9UJ98 1225 aa11.15□□□□□ -0.62
RIOK3-211ENST00000584992 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
RIOK3-211ENST00000584992 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
RIOK3-211ENST00000584992 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
RIOK3-211ENST00000584992 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
RIOK3-211ENST00000584992 MIER1Q8N108 512 aa11.03□□□□□ -0.64
RIOK3-211ENST00000584992 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
RIOK3-211ENST00000584992 IFNLR1Q8IU57 520 aaPredicted RBP11.02□□□□□ -0.65
RIOK3-211ENST00000584992 AMER1Q5JTC6 1135 aaPredicted RBP11.01□□□□□ -0.65
RIOK3-211ENST00000584992 RTN4Q9NQC3 1192 aaKnown RBP11□□□□□ -0.65
RIOK3-211ENST00000584992 PRR29P0C7W0 189 aa10.99□□□□□ -0.65
RIOK3-211ENST00000584992 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
RIOK3-211ENST00000584992 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
RIOK3-211ENST00000584992 SPOCK2Q92563 424 aa10.88□□□□□ -0.67
RIOK3-211ENST00000584992 CREBZFQ9NS37 354 aa10.87□□□□□ -0.67
RIOK3-211ENST00000584992 ZBTB47Q9UFB7 747 aaPredicted RBP10.87□□□□□ -0.67
RIOK3-211ENST00000584992 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
RIOK3-211ENST00000584992 CHADLQ6NUI6 762 aa10.8□□□□□ -0.68
RIOK3-211ENST00000584992 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
RIOK3-211ENST00000584992 MNX1P50219 401 aaPredicted RBP10.75□□□□□ -0.69
RIOK3-211ENST00000584992 FXR2P51116 673 aaKnown RBP eCLIP10.75□□□□□ -0.69
RIOK3-211ENST00000584992 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
RIOK3-211ENST00000584992 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
RIOK3-211ENST00000584992 PKD2Q13563 968 aa10.71□□□□□ -0.69
RIOK3-211ENST00000584992 NPM1P06748 294 aaKnown RBP eCLIP10.7□□□□□ -0.7
RIOK3-211ENST00000584992 NUBP1P53384 320 aa10.7□□□□□ -0.7
RIOK3-211ENST00000584992 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
RIOK3-211ENST00000584992 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
RIOK3-211ENST00000584992 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
RIOK3-211ENST00000584992 RASEFQ8IZ41 740 aa10.64□□□□□ -0.71
RIOK3-211ENST00000584992 GSE1Q14687 1217 aa10.63□□□□□ -0.71
RIOK3-211ENST00000584992 FAM212AQ96EL1 285 aa10.63□□□□□ -0.71
RIOK3-211ENST00000584992 DCAF8L2P0C7V8 631 aa10.6□□□□□ -0.71
RIOK3-211ENST00000584992 TSPYL2Q9H2G4 693 aaPredicted RBP10.56□□□□□ -0.72
RIOK3-211ENST00000584992 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms