RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 RHAGQ02094 409 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 PICALMQ13492 652 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 KRT32Q14532 448 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 LRRC41Q15345 812 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 SF3B4Q15427 424 aaKnown RBP eCLIP9.39□□□□□ -0.918e-7■■■■□ 26.4
TRIM25-203ENST00000570473 AANATQ16613 207 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 TCHHL1Q5QJ38 904 aaPredicted RBP9.39□□□□□ -0.91
TRIM25-203ENST00000570473 TMC5Q6UXY8 1006 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 UTS2BQ765I0 119 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 KRT26Q7Z3Y9 468 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 PEX26Q7Z412 305 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 ELMOD2Q8IZ81 293 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 DPP10Q8N608 796 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 PIK3C3Q8NEB9 887 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 AGR3Q8TD06 166 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 SLC44A1Q8WWI5 657 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 BSNDQ8WZ55 320 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 NGLY1Q96IV0 654 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 PIP5K1AQ99755 562 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 NEURL2Q9BR09 285 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 CLPBQ9H078 707 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.39□□□□□ -0.911e-7■■□□□ 12.5
TRIM25-203ENST00000570473 TMEM60Q9H2L4 133 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 SP110Q9HB58 689 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 DDX19AQ9NUU7 478 aaKnown RBP9.39□□□□□ -0.91
TRIM25-203ENST00000570473 HYPKQ9NX55 129 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 DDX43Q9NXZ2 648 aaKnown RBP9.39□□□□□ -0.91
TRIM25-203ENST00000570473 SELENONQ9NZV5 590 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 ERVK-19Q9WJR5 959 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 MTMR6Q9Y217 621 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 KLF2Q9Y5W3 355 aaPredicted RBP9.39□□□□□ -0.91
TRIM25-203ENST00000570473 SPATA31E1Q6ZUB1 1445 aa9.39□□□□□ -0.91
TRIM25-203ENST00000570473 LAMC1P11047 1609 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 PCDH11XQ9BZA7 1347 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 PCDH11YQ9BZA8 1340 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 CDK13Q14004 1512 aaKnown RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 A0A0B4J269 797 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 VPS37CA5D8V6 355 aaPredicted RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 GMNCA6NCL1 334 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 HSBP1L1C9JCN9 74 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 TRIM77I1YAP6 450 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 MASP2O00187 686 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 AP3D1O14617 1153 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 GNB5O14775 395 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 SMAD6O43541 496 aaKnown RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 ZNF862O60290 1169 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 DKC1O60832 514 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 NBNO60934 754 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 TIPRLO75663 272 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 RSL1D1O76021 490 aaKnown RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 CLPTM1O96005 669 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 FDX1P10109 184 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 NPR1P16066 1061 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 HOXB8P17481 243 aaPredicted RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 CCNE1P24864 410 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 CASP14P31944 242 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 VHLP40337 213 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 MDH1P40925 334 aaKnown RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 PCP4P48539 62 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 POU3F4P49335 361 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 TUBP50607 506 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 HIRAP54198 1017 aaPredicted RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 STX1BP61266 288 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 TGFB2P61812 414 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 FANCCQ00597 558 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 TYRO3Q06418 890 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 FOXO1Q12778 655 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 RESTQ13127 1097 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 SMAD4Q13485 552 aaKnown RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 MRPL58Q14197 206 aaKnown RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 PPA1Q15181 289 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 TAF12Q16514 161 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 FAM209BQ5JX69 171 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 PRMT9Q6P2P2 845 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 C4orf50Q6ZRC1 276 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 STXBP4Q6ZWJ1 553 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 USP43Q70EL4 1123 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 MIB1Q86YT6 1006 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 CCDC36Q8IYA8 594 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 PGBD3Q8N328 593 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 CSGALNACT2Q8N6G5 542 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 NIPA2Q8N8Q9 360 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 GRPEL2Q8TAA5 225 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 ZNF461Q8TAF7 563 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 ASAP3Q8TDY4 903 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 RNF139Q8WU17 664 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 FAM216AQ8WUB2 273 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 WASF1Q92558 559 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 MYDGFQ969H8 173 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 EDC3Q96F86 508 aaKnown RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 ZSCAN31Q96LW9 406 aaPredicted RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 TESK2Q96S53 571 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 LLPHQ9BRT6 129 aaKnown RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 TRIM62Q9BVG3 475 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 ACAT2Q9BWD1 397 aa9.38□□□□□ -0.91
TRIM25-203ENST00000570473 GCOM2Q9BZD3 368 aaPredicted RBP9.38□□□□□ -0.91
TRIM25-203ENST00000570473 POLR1EQ9GZS1 481 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms