RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 BBOX1O75936 387 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 LMNAP02545 664 aaKnown RBP21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CYP1A1P04798 512 aaPredicted RBP21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 P4HBP07237 508 aaKnown RBP21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 GNA15P30679 374 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 GPC3P51654 580 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 AGTPBP1Q9UPW5 1226 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ALOX15BO15296 676 aa21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SORBS2O94875 1100 aaKnown RBP21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 FAAP100Q0VG06 881 aa21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SLC39A4Q6P5W5 647 aa21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 IGDCC3Q8IVU1 814 aa21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ARID3BQ8IVW6 561 aaPredicted RBP21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CCDC124Q96CT7 223 aaKnown RBP21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ANKRD27Q96NW4 1050 aa21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ACAP3Q96P50 834 aa21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 GLIS2Q9BZE0 524 aaPredicted RBP21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 COA1Q9GZY4 146 aa21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 KMT5AQ9NQR1 393 aa21.52■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ADAMTSL1Q8N6G6 1762 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ZNFX1Q9P2E3 1918 aaKnown RBP21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TRAFD1O14545 582 aaPredicted RBP21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ABHD2P08910 425 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 YWHAGP61981 247 aaKnown RBP eCLIP21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RNASEH2BQ5TBB1 312 aaKnown RBP21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ZCCHC23Q6ZST2 131 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MON1BQ7L1V2 547 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ZNF276Q8N554 614 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ALLCQ8N6M5 410 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RBM15BQ8NDT2 890 aaKnown RBP21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RILPQ96NA2 401 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SLITRK1Q96PX8 696 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 WDR83Q9BRX9 315 aaKnown RBP21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TMX4Q9H1E5 349 aaPredicted RBP21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SAR1AQ9NR31 198 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SERPINA10Q9UK55 444 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TELO2Q9Y4R8 837 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 NFIBO00712 420 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 OPHN1O60890 802 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TOP3BO95985 862 aaKnown RBP21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 QARSP47897 775 aaKnown RBP21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 GTF2BQ00403 316 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PYDC1Q8WXC3 89 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 FNBP1Q96RU3 617 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 GORASP1Q9BQQ3 440 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 LNPEPQ9UIQ6 1025 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PPM1HQ9ULR3 514 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PCDHB2Q9Y5E7 798 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 IKBKGQ9Y6K9 419 aa21.51■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ARHGAP42A6NI28 874 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ZWINTO95229 277 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MCL1Q07820 350 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 C1orf146Q5VVC0 180 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CDHR3Q6ZTQ4 885 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CEP120Q8N960 986 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 OXNAD1Q96HP4 312 aaPredicted RBP21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TTC25Q96NG3 672 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 LYNP07948 512 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SPATA31D3P0C874 917 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CDK16Q00536 496 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 WDR44Q5JSH3 913 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RIPOR1Q6ZS17 1223 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SPATA31D4Q6ZUB0 917 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 LDHDQ86WU2 507 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 POU5F2Q8N7G0 328 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 EXD1Q8NHP7 514 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 EZH1Q92800 747 aaPredicted RBP21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MXRA8Q9BRK3 442 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TRIM56Q9BRZ2 755 aaKnown RBP21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PCSK1NQ9UHG2 260 aa21.5■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MAGEA13PA6NCF6 341 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ANKRD33BA6NCL7 494 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TXNDC9O14530 226 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 HLA-DRAP01903 254 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RTP1P59025 263 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 OGDHQ02218 1023 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CYP24A1Q07973 514 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RC3H1Q5TC82 1133 aaKnown RBP21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 KATNAL2Q8IYT4 538 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ACTL9Q8TC94 416 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TLE6Q9H808 572 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 DCAF8L1A6NGE4 600 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 AP1B1Q10567 949 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PTK7Q13308 1070 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CUL3Q13618 768 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MTHFD1LQ6UB35 978 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 FAM71DQ8N9W8 422 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TMEM161BQ8NDZ6 487 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 GMCL1Q96IK5 515 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ZBTB45Q96K62 511 aaPredicted RBP21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ECE2O60344 883 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 VIL1P09327 827 aaKnown RBP21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 POTEJP0CG39 1038 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CCNFP41002 786 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 EPHB1P54762 984 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 OTUD4Q01804 1114 aaKnown RBP21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 BMPR2Q13873 1038 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 UBAP2LQ14157 1087 aaKnown RBP21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 KBTBD12Q3ZCT8 623 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 FAXCQ5TGI0 409 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms