RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PTH1RQ03431 593 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 TMEM132AQ24JP5 1023 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 XKR9Q5GH70 373 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 C6orf132Q5T0Z8 1188 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 TMPRSS12Q86WS5 348 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 MAB21L3Q8N8X9 362 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 IL17RCQ8NAC3 791 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 DDX12PQ92771 950 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 FGF11Q92914 225 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 TMEM176AQ96HP8 235 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 FAM124BQ9H5Z6 455 aaPredicted RBP10.3□□□□□ -0.76
NEDD1-211ENST00000557454 GAREM1Q9H706 876 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 KIF9Q9HAQ2 790 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 DUS2Q9NX74 493 aaKnown RBP10.3□□□□□ -0.76
NEDD1-211ENST00000557454 CALCOCO1Q9P1Z2 691 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 SUSD2Q9UGT4 822 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 USP20Q9Y2K6 914 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 NUB1Q9Y5A7 615 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 WNT6Q9Y6F9 365 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 PLXND1Q9Y4D7 1925 aa10.3□□□□□ -0.76
NEDD1-211ENST00000557454 IGHV1OR15-9A0A0B4J2B8 117 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 ESYT2A0FGR8 921 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 ZBTB39O15060 712 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 TNFSF14O43557 240 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 BRINP1O60477 761 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 TDP2O95551 362 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 ZNF883P0CG24 379 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 GNSP15586 552 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 MAOBP27338 520 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 NMT1P30419 496 aaKnown RBP10.29□□□□□ -0.76
NEDD1-211ENST00000557454 OPRD1P41143 372 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 IFNAR2P48551 515 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 USP11P51784 963 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 RIPPLY3P57055 190 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 TMPRSS3P57727 454 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 MRPS21P82921 87 aaKnown RBP10.29□□□□□ -0.76
NEDD1-211ENST00000557454 NFATC3Q12968 1075 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 MTF1Q14872 753 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 CENPPQ6IPU0 288 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 ITIH5Q86UX2 942 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 ERICH1Q86X53 443 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 ATAD1Q8NBU5 361 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 APPL2Q8NEU8 664 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 OSCP1Q8WVF1 389 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 ATP2A3Q93084 1043 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 NAF1Q96HR8 494 aaKnown RBP10.29□□□□□ -0.76
NEDD1-211ENST00000557454 TMEM87BQ96K49 555 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 SUSD3Q96L08 255 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 LGMNQ99538 433 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 LXNQ9BS40 222 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 MTA3Q9BTC8 594 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 LRRC2Q9BYS8 371 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 FAM117AQ9C073 453 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 ZMYND12Q9H0C1 365 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 C6orf50Q9HD87 102 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 TDP1Q9NUW8 608 aa10.29□□□□□ -0.76
NEDD1-211ENST00000557454 PRMT7Q9NVM4 692 aaPredicted RBP10.29□□□□□ -0.76
NEDD1-211ENST00000557454 SMIM28A0A1B0GU29 152 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 MTMR11A4FU01 709 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 LRRIQ4A6NIV6 560 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 DKC1O60832 514 aaKnown RBP eCLIP10.28□□□□□ -0.76
NEDD1-211ENST00000557454 ADAM23O75077 832 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 CER1O95813 267 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 MYF5P13349 255 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 JUPP14923 745 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 MCM4P33991 863 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 HNF1BP35680 557 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 ARL2P36404 184 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 MATKP42679 507 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 LIFRP42702 1097 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 UBAP2LQ14157 1087 aaKnown RBP10.28□□□□□ -0.76
NEDD1-211ENST00000557454 RTP5Q14D33 572 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 EML3Q32P44 896 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 Q4G0T1 1027 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 EOGTQ5NDL2 527 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 EEF1DP3Q658K8 133 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 DBX2Q6ZNG2 339 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 ETNPPLQ8TBG4 499 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 PRIMPOLQ96LW4 560 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 ADPGKQ9BRR6 497 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 RBM28Q9NW13 759 aaKnown RBP10.28□□□□□ -0.76
NEDD1-211ENST00000557454 CYP8B1Q9UNU6 501 aa10.28□□□□□ -0.76
NEDD1-211ENST00000557454 NID2Q14112 1375 aa10.27□□□□□ -0.76
NEDD1-211ENST00000557454 EDN1P05305 212 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 P4HBP07237 508 aaKnown RBP10.27□□□□□ -0.77
NEDD1-211ENST00000557454 GABRG2P18507 467 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 ATF6P18850 670 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 CR2P20023 1033 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 MCM5P33992 734 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 CDR1P51861 262 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 BNC1Q01954 994 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 MESP2Q0VG99 397 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 TARDBPQ13148 414 aaKnown RBP eCLIP10.27□□□□□ -0.771e-7■■■■□ 24.6
NEDD1-211ENST00000557454 GPR17Q13304 367 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 PFKFB3Q16875 520 aaPredicted RBP10.27□□□□□ -0.77
NEDD1-211ENST00000557454 HLA-BQ31612 363 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 SYCP2LQ5T4T6 812 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 EMC10Q5UCC4 262 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 TXNDC8Q6A555 127 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms