RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FUBP3Q96I24 572 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 CNOT6LQ96LI5 555 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 MRPL45Q9BRJ2 306 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 PI4K2AQ9BTU6 479 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 CRISPLD1Q9H336 500 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 FAM124BQ9H5Z6 455 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 APOBEC3GQ9HC16 384 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 ANO10Q9NW15 660 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 RAB20Q9NX57 234 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 USTQ9Y2C2 406 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 PCDHB5Q9Y5E4 795 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 LOC730098B7Z3J9 87 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 HCRTO43612 131 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 GNL1P36915 607 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 PSMC1P62191 440 aaKnown RBP12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 INCA1Q0VD86 236 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 TWF1Q12792 350 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 DUSP4Q13115 394 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 CFAP221Q4G0U5 840 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 FAM171BQ6P995 826 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 C4orf50Q6ZRC1 276 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 TDRD5Q8NAT2 981 aaKnown RBP12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 OR6B3Q8NGW1 331 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 SEMA4DQ92854 862 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 NECAB3Q96P71 396 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 COL25A1Q9BXS0 654 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 SDCBP2Q9H190 292 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 CYP3A43Q9HB55 503 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 AVENQ9NQS1 362 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 TMLHEQ9NVH6 421 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 ABI2Q9NYB9 513 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 NME7Q9Y5B8 376 aa12.51□□□□□ -0.41
TRAFD1-209ENST00000552896 A8MXQ7 604 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 AFPP02771 609 aaKnown RBP12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 HAPLN1P10915 354 aaPredicted RBP12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 LMO2P25791 158 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 MAGEA11P43364 429 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 ALDH1A3P47895 512 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 TUFMP49411 452 aaKnown RBP12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 EPHB3P54753 998 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 CETN1Q12798 172 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 MGAT5BQ3V5L5 792 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 PABPC1LQ4VXU2 614 aaKnown RBP12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 WDR44Q5JSH3 913 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 C11orf57Q6ZUT1 292 aaPredicted RBP12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 OTOP3Q7RTS5 596 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 GRASPQ7Z6J2 395 aaPredicted RBP12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 UNC93AQ86WB7 457 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 IRF2BP1Q8IU81 584 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 TTC39CQ8N584 583 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 LEMD2Q8NC56 503 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 B3GALNT2Q8NCR0 500 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 MYCBPAPQ8TBZ2 947 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 MYLPFQ96A32 169 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 ELMO3Q96BJ8 720 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 TNIP3Q96KP6 325 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 SEPT5Q99719 369 aaPredicted RBP12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 DNAJC25Q9H1X3 360 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 CRTAC1Q9NQ79 661 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 ASB3Q9Y575 518 aa12.5□□□□□ -0.41
TRAFD1-209ENST00000552896 ATP8B3O60423 1300 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 MYBPHLA2RUH7 354 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 C2CD4DB7Z1M9 353 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 ATP2C2O75185 946 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 RHOP08100 348 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 PDGFRBP09619 1106 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 ATF6P18850 670 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 TRIM21P19474 475 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 FSHRP23945 695 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 SSTR3P32745 418 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 EPHA5P54756 1037 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 CDH8P55286 799 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 TYRO3Q06418 890 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 KCNH2Q12809 1159 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 VEPH1Q14D04 833 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 CCDC142Q17RM4 750 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 MDH1BQ5I0G3 518 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 IQCEQ6IPM2 695 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 GET4Q7L5D6 327 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 ITIH5Q86UX2 942 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 SPATA2LQ8IUW3 424 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 GJD3Q8N144 294 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 ENOX1Q8TC92 643 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 PSMG2Q969U7 264 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 ACSF2Q96CM8 615 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 PCED1BQ96HM7 432 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 RPGRIP1Q96KN7 1286 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 DCBLD2Q96PD2 775 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 DPEP3Q9H4B8 488 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.49□□□□□ -0.412e-6■■■■■ 41.9
TRAFD1-209ENST00000552896 ASAH2Q9NR71 780 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 HCFC1R1Q9NWW0 138 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 CEP72Q9P209 647 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 DNMT3BQ9UBC3 853 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 HMGXB4Q9UGU5 601 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 GTF3C4Q9UKN8 822 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms