RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 LRRIQ4A6NIV6 560 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 TDP2O95551 362 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 CER1O95813 267 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 ZNF883P0CG24 379 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 MYF5P13349 255 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 LIG1P18858 919 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 OPRD1P41143 372 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 MATKP42679 507 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 YWHAHQ04917 246 aaPredicted RBP12.33□□□□□ -0.44
GPN3-208ENST00000550974 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
GPN3-208ENST00000550974 TAF12Q16514 161 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 PTPRNQ16849 979 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 Q4G0T1 1027 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 EMC10Q5UCC4 262 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 BROXQ5VW32 411 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 DBX2Q6ZNG2 339 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 SFTPA1Q8IWL2 248 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 C4orf19Q8IY42 314 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 OSCP1Q8WVF1 389 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 PRIMPOLQ96LW4 560 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 LXNQ9BS40 222 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 TIMM13Q9Y5L4 95 aaPredicted RBP12.33□□□□□ -0.44
GPN3-208ENST00000550974 GNA11P29992 359 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 NMT1P30419 496 aaKnown RBP12.32□□□□□ -0.44
GPN3-208ENST00000550974 HNF1BP35680 557 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
GPN3-208ENST00000550974 GPR17Q13304 367 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 UBAP2LQ14157 1087 aaKnown RBP12.32□□□□□ -0.44
GPN3-208ENST00000550974 VEPH1Q14D04 833 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 RTP5Q14D33 572 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 RTN1Q16799 776 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 PFKFB3Q16875 520 aaPredicted RBP12.32□□□□□ -0.44
GPN3-208ENST00000550974 HLA-BQ31612 363 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 EML3Q32P44 896 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 EEF1DP3Q658K8 133 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 TXNDC8Q6A555 127 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 SEPT5Q99719 369 aaPredicted RBP12.32□□□□□ -0.44
GPN3-208ENST00000550974 NRSN2Q9GZP1 204 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 RGL1Q9NZL6 768 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 CALCOCO1Q9P1Z2 691 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 ZMYM5Q9UJ78 669 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 CYP8B1Q9UNU6 501 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 ATMQ13315 3056 aa12.32□□□□□ -0.44
GPN3-208ENST00000550974 GOLGA4Q13439 2230 aaKnown RBP12.31□□□□□ -0.44
GPN3-208ENST00000550974 A0A1B0GTW7 788 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 MTMR11A4FU01 709 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 TERTO14746 1132 aaKnown RBP12.31□□□□□ -0.44
GPN3-208ENST00000550974 BRINP1O60477 761 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 ADAM23O75077 832 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 NDUFS2O75306 463 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 GABRG2P18507 467 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 ACTN2P35609 894 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 CDR1P51861 262 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 SERINC3Q13530 473 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 SUZ12Q15022 739 aaKnown RBP12.31□□□□□ -0.44
GPN3-208ENST00000550974 WDR45BQ5MNZ6 344 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 ETNPPLQ8TBG4 499 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 GIPC2Q8TF65 315 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 CCDC12Q8WUD4 166 aaPredicted RBP12.31□□□□□ -0.44
GPN3-208ENST00000550974 ZNF419Q96HQ0 510 aaPredicted RBP12.31□□□□□ -0.44
GPN3-208ENST00000550974 ACAP3Q96P50 834 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
GPN3-208ENST00000550974 SLC38A7Q9NVC3 462 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 GMIPQ9P107 970 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 PCDHGB2Q9Y5G2 931 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 CEP192Q8TEP8 1941 aa12.31□□□□□ -0.44
GPN3-208ENST00000550974 RIPPLY3P57055 190 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 CTTNQ14247 550 aaKnown RBP12.3□□□□□ -0.44
GPN3-208ENST00000550974 FAM187BQ17R55 369 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 HSF5Q4G112 596 aaPredicted RBP12.3□□□□□ -0.44
GPN3-208ENST00000550974 MAEAQ7L5Y9 396 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 ERICH1Q86X53 443 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 ZBTB8OSQ8IWT0 167 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 ZCCHC9Q8N567 271 aaKnown RBP12.3□□□□□ -0.44
GPN3-208ENST00000550974 ENGASEQ8NFI3 743 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 TBCKQ8TEA7 893 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 MIR1-1HGQ9H1L0 117 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 LINC00597Q9H2U6 94 aa12.3□□□□□ -0.44
GPN3-208ENST00000550974 ANKRD17O75179 2603 aaKnown RBP12.3□□□□□ -0.44
GPN3-208ENST00000550974 PLXND1Q9Y4D7 1925 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 DOPEY2Q9Y3R5 2298 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 DGAT1O75907 488 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 OAZ2O95190 189 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 ATF6P18850 670 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 CR2P20023 1033 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 DDX6P26196 483 aaKnown RBP eCLIP12.29□□□□□ -0.44
GPN3-208ENST00000550974 RPL9P32969 192 aaKnown RBP12.29□□□□□ -0.44
GPN3-208ENST00000550974 YARSP54577 528 aaKnown RBP12.29□□□□□ -0.44
GPN3-208ENST00000550974 UCNP55089 124 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 NFKB2Q00653 900 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 PPP2R5CQ13362 524 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 TBC1D25Q3MII6 688 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 DCAF4L1Q3SXM0 396 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 PPP4R3AQ6IN85 833 aa12.29□□□□□ -0.44
GPN3-208ENST00000550974 APOA5Q6Q788 366 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms