RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 SNX13Q9Y5W8 968 aa3.66□□□□□ -1.82
KNTC1-212ENST00000541466 PCSK5Q92824 1860 aa3.66□□□□□ -1.82
KNTC1-212ENST00000541466 USP19O94966 1318 aa3.66□□□□□ -1.82
KNTC1-212ENST00000541466 A0A0B4J269 797 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 F5H697 171 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 PMM2O15305 246 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 FOXN1O15353 648 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 TRIAP1O43715 76 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 THP07101 528 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 ATXN1LP0C7T5 689 aaKnown RBP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 TRIM27P14373 513 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 ZKSCAN1P17029 563 aaPredicted RBP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 CD6P30203 668 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 VIPR2P41587 438 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 AVPR1BP47901 424 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 PXNP49023 591 aaPredicted RBP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 ARFIP2P53365 341 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 SUMO3P55854 103 aaPredicted RBP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 LOXL3P58215 753 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 BLOC1S1P78537 153 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 CTBP1Q13363 440 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 TUBB3Q13509 450 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 IQCB1Q15051 598 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 RBM20Q5T481 1227 aaKnown RBP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 ABHD17BQ5VST6 288 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 SP5Q6BEB4 398 aaPredicted RBP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 CYB5RLQ6IPT4 315 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 TMEM108Q6UXF1 575 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 GPR149Q86SP6 731 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 CCDC146Q8IYE0 955 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 FAM9AQ8IZU1 332 aaPredicted RBP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 SLC44A3Q8N4M1 653 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 Q8NA96 180 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 B3GALNT2Q8NCR0 500 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 POC1BQ8TC44 478 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 NAF1Q96HR8 494 aaKnown RBP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 HEPHQ9BQS7 1158 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 MS4A7Q9GZW8 240 aaPredicted RBP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 NUP62CLQ9H1M0 184 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 PNPLA8Q9NP80 782 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 DDX21Q9NR30 783 aaKnown RBP eCLIP3.65□□□□□ -1.83
KNTC1-212ENST00000541466 STK32BQ9NY57 414 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 DKK2Q9UBU2 259 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 CORO2BQ9UQ03 480 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 SHOC2Q9UQ13 582 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 DMTF1Q9Y222 760 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 TNFRSF18Q9Y5U5 241 aa3.65□□□□□ -1.83
KNTC1-212ENST00000541466 A0A087WWL8 130 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 PIPSLA2A3N6 862 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 TRIM43BA6NCK2 446 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 RHPN2P1A8MT19 583 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 DCLK1O15075 740 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 HKR1P10072 659 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 XRCC6P12956 609 aaKnown RBP eCLIP3.64□□□□□ -1.83
KNTC1-212ENST00000541466 PPP3CBP16298 524 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 LMO1P25800 156 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 ZEB1P37275 1124 aaPredicted RBP3.64□□□□□ -1.83
KNTC1-212ENST00000541466 ZNF134P52741 427 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 LILRA4P59901 499 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 RPS16P62249 146 aaKnown RBP3.64□□□□□ -1.83
KNTC1-212ENST00000541466 KRT17Q04695 432 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 IFIT5Q13325 482 aaKnown RBP3.64□□□□□ -1.83
KNTC1-212ENST00000541466 BOP1Q14137 746 aaKnown RBP3.64□□□□□ -1.83
KNTC1-212ENST00000541466 SF3B3Q15393 1217 aaKnown RBP3.64□□□□□ -1.83
KNTC1-212ENST00000541466 C3orf38Q5JPI3 329 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 VRK3Q8IV63 474 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 SUPT20HQ8NEM7 779 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 TOR1AIP2Q8NFQ8 470 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 PJA1Q8NG27 643 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 SLC30A5Q8TAD4 765 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 RAPGEF4Q8WZA2 1011 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 CAVIN3Q969G5 261 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 TRIM43Q96BQ3 446 aaPredicted RBP3.64□□□□□ -1.83
KNTC1-212ENST00000541466 Q96MF0 132 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 DPH1Q9BZG8 443 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 TPSD1Q9BZJ3 242 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 ZNF518BQ9C0D4 1074 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 BTBD1Q9H0C5 482 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 ARNT2Q9HBZ2 717 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 HDAC9Q9UKV0 1011 aa3.64□□□□□ -1.83
KNTC1-212ENST00000541466 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.64□□□□□ -1.83
KNTC1-212ENST00000541466 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.64□□□□□ -1.83
KNTC1-212ENST00000541466 MBD3L4A6NDZ8 208 aaPredicted RBP3.63□□□□□ -1.83
KNTC1-212ENST00000541466 MBD3L3A6NE82 208 aaPredicted RBP3.63□□□□□ -1.83
KNTC1-212ENST00000541466 TMEM233B4DJY2 109 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 APAF1O14727 1248 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 PEX1O43933 1283 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 RASSF9O75901 435 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 NUDT3O95989 172 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 MYL3P08590 195 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 EGR2P11161 476 aaPredicted RBP3.63□□□□□ -1.83
KNTC1-212ENST00000541466 CYP2C9P11712 490 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 PHKG2P15735 406 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 RPL17P18621 184 aaKnown RBP3.63□□□□□ -1.83
KNTC1-212ENST00000541466 GATA3P23771 443 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 KLRC1P26715 233 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 TOB1P50616 345 aaPredicted RBP3.63□□□□□ -1.83
KNTC1-212ENST00000541466 WNT3P56703 355 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 FMO1Q01740 532 aa3.63□□□□□ -1.83
KNTC1-212ENST00000541466 SCAPQ12770 1279 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms