RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
KNTC1-212ENST00000541466 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
KNTC1-212ENST00000541466 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
KNTC1-212ENST00000541466 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
KNTC1-212ENST00000541466 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
KNTC1-212ENST00000541466 FOXD1Q16676 465 aa15.17■□□□□ 0.02
KNTC1-212ENST00000541466 MSH5O43196 834 aa14.43□□□□□ -0.1
KNTC1-212ENST00000541466 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
KNTC1-212ENST00000541466 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
KNTC1-212ENST00000541466 ADRA2BP18089 450 aa13.54□□□□□ -0.24
KNTC1-212ENST00000541466 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
KNTC1-212ENST00000541466 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
KNTC1-212ENST00000541466 DMRT2Q9Y5R5 561 aa12.7□□□□□ -0.38
KNTC1-212ENST00000541466 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
KNTC1-212ENST00000541466 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
KNTC1-212ENST00000541466 RNF39Q9H2S5 420 aa12.28□□□□□ -0.44
KNTC1-212ENST00000541466 DCAF8L1A6NGE4 600 aa12.17□□□□□ -0.46
KNTC1-212ENST00000541466 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
KNTC1-212ENST00000541466 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
KNTC1-212ENST00000541466 POTEHQ6S545 545 aa11.87□□□□□ -0.51
KNTC1-212ENST00000541466 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
KNTC1-212ENST00000541466 DNAJC5BQ9UF47 199 aa11.69□□□□□ -0.54
KNTC1-212ENST00000541466 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
KNTC1-212ENST00000541466 CNKSR2Q8WXI2 1034 aa11.59□□□□□ -0.55
KNTC1-212ENST00000541466 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
KNTC1-212ENST00000541466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.35□□□□□ -0.592e-6■■□□□ 12
KNTC1-212ENST00000541466 DSG3P32926 999 aa11.25□□□□□ -0.61
KNTC1-212ENST00000541466 NPM3O75607 178 aaKnown RBP11.16□□□□□ -0.62
KNTC1-212ENST00000541466 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
KNTC1-212ENST00000541466 CAPN15O75808 1086 aa11.11□□□□□ -0.63
KNTC1-212ENST00000541466 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
KNTC1-212ENST00000541466 KCNA4P22459 653 aa10.96□□□□□ -0.65
KNTC1-212ENST00000541466 ABCB7O75027 752 aa10.8□□□□□ -0.68
KNTC1-212ENST00000541466 CHRDL2Q6WN34 429 aa10.79□□□□□ -0.68
KNTC1-212ENST00000541466 SP7Q8TDD2 431 aaPredicted RBP10.78□□□□□ -0.68
KNTC1-212ENST00000541466 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
KNTC1-212ENST00000541466 RBM42Q9BTD8 480 aaKnown RBP10.71□□□□□ -0.69
KNTC1-212ENST00000541466 ZNF219Q9P2Y4 722 aaPredicted RBP10.7□□□□□ -0.7
KNTC1-212ENST00000541466 SLC4A2P04920 1241 aa10.63□□□□□ -0.71
KNTC1-212ENST00000541466 APLP2Q06481 763 aa10.62□□□□□ -0.71
KNTC1-212ENST00000541466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.52□□□□□ -0.73
KNTC1-212ENST00000541466 HNRNPUL2Q1KMD3 747 aaKnown RBP10.52□□□□□ -0.73
KNTC1-212ENST00000541466 SAMD1Q6SPF0 538 aaPredicted RBP10.44□□□□□ -0.74
KNTC1-212ENST00000541466 PIP4P2Q8N4L2 257 aa10.39□□□□□ -0.75
KNTC1-212ENST00000541466 SLC4A1APQ9BWU0 796 aaKnown RBP10.39□□□□□ -0.75
KNTC1-212ENST00000541466 HAX1O00165 279 aa10.37□□□□□ -0.75
KNTC1-212ENST00000541466 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
KNTC1-212ENST00000541466 AKT1S1Q96B36 256 aa10.33□□□□□ -0.76
KNTC1-212ENST00000541466 POLA2Q14181 598 aa10.32□□□□□ -0.76
KNTC1-212ENST00000541466 EVX2Q03828 476 aa10.25□□□□□ -0.77
KNTC1-212ENST00000541466 REM2Q8IYK8 340 aaPredicted RBP10.25□□□□□ -0.77
KNTC1-212ENST00000541466 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
KNTC1-212ENST00000541466 FXR2P51116 673 aaKnown RBP eCLIP10.22□□□□□ -0.77
KNTC1-212ENST00000541466 PITPNM1O00562 1244 aa10.15□□□□□ -0.78
KNTC1-212ENST00000541466 LHX8Q68G74 356 aa10.11□□□□□ -0.79
KNTC1-212ENST00000541466 ATF5Q9Y2D1 282 aaPredicted RBP10.07□□□□□ -0.8
KNTC1-212ENST00000541466 PLSCR2Q9NRY7 297 aa10.05□□□□□ -0.8
KNTC1-212ENST00000541466 ZBTB22O15209 634 aa10.02□□□□□ -0.81
KNTC1-212ENST00000541466 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
KNTC1-212ENST00000541466 ZBTB12Q9Y330 459 aaPredicted RBP10.01□□□□□ -0.81
KNTC1-212ENST00000541466 GABBR2O75899 941 aa9.95□□□□□ -0.82
KNTC1-212ENST00000541466 C19orf67A6NJJ6 358 aa9.92□□□□□ -0.82
KNTC1-212ENST00000541466 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
KNTC1-212ENST00000541466 EHMT2Q96KQ7 1210 aa9.89□□□□□ -0.83
KNTC1-212ENST00000541466 PRKAR2AP13861 404 aaKnown RBP9.86□□□□□ -0.83
KNTC1-212ENST00000541466 POTEIP0CG38 1075 aa9.77□□□□□ -0.85
KNTC1-212ENST00000541466 FBLN2P98095 1184 aa9.77□□□□□ -0.85
KNTC1-212ENST00000541466 CLEC11AQ9Y240 323 aa9.69□□□□□ -0.86
KNTC1-212ENST00000541466 SPDYE1Q8NFV5 336 aaPredicted RBP9.68□□□□□ -0.86
KNTC1-212ENST00000541466 SPDYE2BA6NHP3 402 aa9.67□□□□□ -0.86
KNTC1-212ENST00000541466 SPDYE6P0CI01 402 aa9.67□□□□□ -0.86
KNTC1-212ENST00000541466 SPDYE2Q495Y8 402 aa9.67□□□□□ -0.86
KNTC1-212ENST00000541466 CSRNP3Q8WYN3 585 aa9.65□□□□□ -0.86
KNTC1-212ENST00000541466 CHADLQ6NUI6 762 aa9.61□□□□□ -0.87
KNTC1-212ENST00000541466 MKRN4PQ13434 485 aaPredicted RBP9.59□□□□□ -0.87
KNTC1-212ENST00000541466 ZNF692Q9BU19 519 aaPredicted RBP9.59□□□□□ -0.87
KNTC1-212ENST00000541466 POTEMA6NI47 508 aa9.55□□□□□ -0.88
KNTC1-212ENST00000541466 OTUD5Q96G74 571 aa9.52□□□□□ -0.89
KNTC1-212ENST00000541466 CLCN6P51797 869 aa9.51□□□□□ -0.89
KNTC1-212ENST00000541466 CD44P16070 742 aaKnown RBP9.5□□□□□ -0.89
KNTC1-212ENST00000541466 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
KNTC1-212ENST00000541466 DCBLD2Q96PD2 775 aa9.48□□□□□ -0.89
KNTC1-212ENST00000541466 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
KNTC1-212ENST00000541466 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
KNTC1-212ENST00000541466 PABPN1Q86U42 306 aaKnown RBP eCLIP9.43□□□□□ -0.92e-7■■■■■ 27.8
KNTC1-212ENST00000541466 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
KNTC1-212ENST00000541466 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
KNTC1-212ENST00000541466 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
KNTC1-212ENST00000541466 ZNF579Q8NAF0 562 aaKnown RBP9.34□□□□□ -0.91
KNTC1-212ENST00000541466 GALR2O43603 387 aaPredicted RBP9.28□□□□□ -0.92
KNTC1-212ENST00000541466 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
KNTC1-212ENST00000541466 LCE2DQ5TA82 110 aaPredicted RBP9.24□□□□□ -0.93
KNTC1-212ENST00000541466 SPDYE4A6NLX3 237 aa9.22□□□□□ -0.93
KNTC1-212ENST00000541466 PELP1Q8IZL8 1130 aaKnown RBP9.2□□□□□ -0.94
KNTC1-212ENST00000541466 STAG3Q9UJ98 1225 aa9.2□□□□□ -0.94
KNTC1-212ENST00000541466 POTEJP0CG39 1038 aa9.17□□□□□ -0.94
KNTC1-212ENST00000541466 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
KNTC1-212ENST00000541466 MAMSTRQ6ZN01 415 aa9.09□□□□□ -0.95
KNTC1-212ENST00000541466 PHF12Q96QT6 1004 aa9.09□□□□□ -0.95
KNTC1-212ENST00000541466 METRNQ9UJH8 293 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms