RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 FAM133AQ8N9E0 248 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 TRIML1Q8N9V2 468 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 SPATA20Q8TB22 786 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 NEK9Q8TD19 979 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 SMCR8Q8TEV9 937 aaPredicted RBP6.75□□□□□ -1.33
COL4A5-207ENST00000504541 ZNF526Q8TF50 670 aaPredicted RBP6.75□□□□□ -1.33
COL4A5-207ENST00000504541 SLC5A5Q92911 643 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 LENG9Q96B70 501 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 CALML4Q96GE6 196 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 CLIC6Q96NY7 704 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 INPP4AQ96PE3 977 aaPredicted RBP6.75□□□□□ -1.33
COL4A5-207ENST00000504541 GSDMAQ96QA5 445 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 PPP1R16BQ96T49 567 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 HSD17B14Q9BPX1 270 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 YIPF4Q9BSR8 244 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 POLR3CQ9BUI4 534 aaPredicted RBP6.75□□□□□ -1.33
COL4A5-207ENST00000504541 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 TNMDQ9H2S6 317 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 BCAS3Q9H6U6 928 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 CNTD2Q9H8S5 307 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 SLC5A4Q9NY91 659 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 NUB1Q9Y5A7 615 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 PHIPQ8WWQ0 1821 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 NFASCO94856 1347 aa6.75□□□□□ -1.33
COL4A5-207ENST00000504541 SLC15A5A6NIM6 579 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
COL4A5-207ENST00000504541 IPO5O00410 1097 aaKnown RBP6.74□□□□□ -1.33
COL4A5-207ENST00000504541 MSH4O15457 936 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 POLR2DO15514 142 aaKnown RBP6.74□□□□□ -1.33
COL4A5-207ENST00000504541 CA12O43570 354 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 SLC37A4O43826 429 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 DKC1O60832 514 aaKnown RBP eCLIP6.74□□□□□ -1.33
COL4A5-207ENST00000504541 PSMD10O75832 226 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 SMC2O95347 1197 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 LYPLA2O95372 231 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 TDP2O95551 362 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 HOXC6P09630 235 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 CCDC192P0DO97 292 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 PFKLP17858 780 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 RPA1P27694 616 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 SFNP31947 248 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 TECP42680 631 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 SLC6A11P48066 632 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 SARSP49591 514 aaKnown RBP6.74□□□□□ -1.33
COL4A5-207ENST00000504541 NCKAP1LP55160 1127 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 MRPS9P82933 396 aaKnown RBP6.74□□□□□ -1.33
COL4A5-207ENST00000504541 GRIN1Q05586 938 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 PLS1Q14651 629 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 EPHA7Q15375 998 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 ZSCAN23Q3MJ62 389 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 LONRF3Q496Y0 759 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 TRIM61Q5EBN2 209 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 RRAGBQ5VZM2 374 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 HAUS3Q68CZ6 603 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 LRSAM1Q6UWE0 723 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 C17orf99Q6UX52 265 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 MAMDC4Q6UXC1 1216 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 CEP57L1Q8IYX8 460 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 CNNM3Q8NE01 707 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 PCDH19Q8TAB3 1148 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 PIP4K2CQ8TBX8 421 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 TSPAN17Q96FV3 270 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 EPSTI1Q96J88 318 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 CLUHP3Q96NS8 147 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 GOLPH3LQ9H4A5 285 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 TXNRD2Q9NNW7 524 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 TUFT1Q9NNX1 390 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 SLC6A20Q9NP91 592 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 KCNH7Q9NS40 1196 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 COL20A1Q9P218 1284 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 TUBE1Q9UJT0 475 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 FAN1Q9Y2M0 1017 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 KDM3AQ9Y4C1 1321 aa6.74□□□□□ -1.33
COL4A5-207ENST00000504541 UTRNP46939 3433 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 PVALEFA0A1B0GWK0 134 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 TCAF2A6NFQ2 919 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 OPA1O60313 960 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 RASGRP1O95267 797 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 CYP2C8P10632 490 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 NCAM1P13591 858 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 PPP1R2P41236 205 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 JAK3P52333 1124 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 C1QTNF8P60827 252 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 MTMR1Q13613 665 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 NEDD9Q14511 834 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 CRY1Q16526 586 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 SDE2Q6IQ49 451 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 SASS6Q6UVJ0 657 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 SLC30A10Q6XR72 485 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 ATG14Q6ZNE5 492 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 C16orf59Q7L2K0 433 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 OTOP3Q7RTS5 596 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 PLEKHH3Q7Z736 793 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 SMAP1Q8IYB5 467 aaPredicted RBP6.73□□□□□ -1.33
COL4A5-207ENST00000504541 GSTCDQ8NEC7 633 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 MZB1Q8WU39 189 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 C7orf25Q9BPX7 421 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 ZNF577Q9BSK1 485 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 FUCA2Q9BTY2 467 aa6.73□□□□□ -1.33
COL4A5-207ENST00000504541 MMTAG2Q9BU76 263 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms