RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 HSPBAP1Q96EW2 488 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ANKRD36BP1Q96IX9 119 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 EPSTI1Q96J88 318 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 HSH2DQ96JZ2 352 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 FAM161BQ96MY7 647 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 FNBP1Q96RU3 617 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 OLFM1Q99784 485 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SYT17Q9BSW7 474 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PITPNM3Q9BZ71 974 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CELF4Q9BZC1 486 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 OSBPL8Q9BZF1 889 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 OSBPL6Q9BZF3 934 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CCSER1Q9C0I3 900 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 LRRC27Q9C0I9 530 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SENP6Q9GZR1 1112 aaPredicted RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 KLC2Q9H0B6 622 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CCDC113Q9H0I3 377 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 GBA3Q9H227 469 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 GANQ9H2C0 597 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 BLZF1Q9H2G9 400 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 EBF3Q9H4W6 596 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 Q9H521 79 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 CNNM2Q9H8M5 875 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PPCSQ9HAB8 311 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SSU72Q9NP77 194 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 PIH1D3Q9NQM4 214 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 ARHGEF4Q9NR80 690 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ATAD3AQ9NVI7 634 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 KBTBD4Q9NVX7 518 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 GID8Q9NWU2 228 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 GIN1Q9NXP7 522 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 EPS15L1Q9UBC2 864 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 RSL24D1Q9UHA3 163 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 GNPTGQ9UJJ9 305 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 RAB26Q9ULW5 256 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 POLIQ9UNA4 740 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SMG5Q9UPR3 1016 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 TRAF3IP3Q9Y228 551 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.87□□□□□ -1.95
MDC1-208ENST00000494654 HCN4Q9Y3Q4 1203 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ZNF711Q9Y462 761 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PCDHB2Q9Y5E7 798 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PDCD11Q14690 1871 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 ZNF106Q9H2Y7 1883 aaKnown RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 GREB1Q4ZG55 1949 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SPATA31A3Q5VYP0 1347 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PCDH11YQ9BZA8 1340 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PLIN4Q96Q06 1357 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 PARP14Q460N5 1801 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TNS3Q68CZ2 1445 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 RALGAPA2Q2PPJ7 1873 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ZNF831Q5JPB2 1677 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 KIAA1217Q5T5P2 1943 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 NPHP3-ACAD11A0A0J9YXS1 232 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TLDC2A0PJX2 215 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 FAM47DPA6NHR8 397 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 MIF4GDA9UHW6 222 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 ERVV-2B6SEH9 535 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 H3BNX3 289 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 GOLGA8MH3BSY2 632 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 EML1O00423 815 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 LAD1O00515 517 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 HGSO14964 777 aaPredicted RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 AREL1O15033 823 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PLSCR1O15162 318 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PFDN6O15212 129 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 GYG2O15488 501 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 RNMTO43148 476 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 DENRO43583 198 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 SORBS3O60504 671 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TLR2O60603 784 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 DKC1O60832 514 aaKnown RBP eCLIP2.86□□□□□ -1.95
MDC1-208ENST00000494654 COBLO75128 1261 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TRMUO75648 421 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 STAM2O75886 525 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TM7SF2O76062 418 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CIAO1O76071 339 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 OR6B1O95007 311 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PGM3O95394 542 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 OXSR1O95747 527 aaPredicted RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 CLPTM1O96005 669 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 GH1P01241 217 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 FGAP02671 866 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TFAP2AP05549 437 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 IGKV5-2P06315 115 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 C8BP07358 591 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CD48P09326 243 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ALOX5P09917 674 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CCDC159P0C7I6 412 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 OCM2P0CE71 109 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 OCMP0CE72 109 aaPredicted RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 RARBP10826 455 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ITGA4P13612 1032 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ZNF23P17027 643 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 KRT4P19013 534 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 RXRAP19793 462 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 LMNB1P20700 586 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CDH3P22223 829 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 AMPD1P23109 780 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CTNNA2P26232 953 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms