RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ELMSAN1Q6PJG2 1045 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 RNF19BQ6ZMZ0 732 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 C4orf50Q6ZRC1 276 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 RBBP8NLQ8NC74 664 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 MYCBPAPQ8TBZ2 947 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 WHAMMQ8TF30 809 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 TMEM176AQ96HP8 235 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 HEXIM2Q96MH2 286 aaKnown RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 ELOVL4Q9GZR5 314 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 CRTAC1Q9NQ79 661 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 CEP72Q9P209 647 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 AFF4Q9UHB7 1163 aaKnown RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 AJAP1Q9UKB5 411 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 EPHB6O15197 1021 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 SPATA31D3P0C874 917 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 GTF2F1P35269 517 aaKnown RBP eCLIP15.5■□□□□ 0.074e-8■■■□□ 16.5
BRCA1-223ENST00000494123 CDR1P51861 262 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 RAD23BP54727 409 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 CYP27A1Q02318 531 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 HYAL1Q12794 435 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 DRAP1Q14919 205 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 SPATA31D4Q6ZUB0 917 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 LRRTM3Q86VH5 581 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 SPATA2LQ8IUW3 424 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 CRYBG2Q8N1P7 616 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 C2orf15Q8WU43 125 aaKnown RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 SHC3Q92529 594 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 NUP58Q9BVL2 599 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 NAA15Q9BXJ9 866 aaKnown RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 STK33Q9BYT3 514 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 ABI2Q9NYB9 513 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 DPP7Q9UHL4 492 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 PCDHB5Q9Y5E4 795 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 HCFC2Q9Y5Z7 792 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 MTMR11A4FU01 709 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 GOLGA6L3A6NEY3 463 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 PRRG1O14668 218 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 AP5Z1O43299 807 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 ABLIM3O94929 683 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 C1RP00736 705 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 ATF2P15336 505 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 CD19P15391 556 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 EPCAMP16422 314 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 PBX1P40424 430 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 FAM171BQ6P995 826 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 EFHBQ8N7U6 833 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 SLC4A11Q8NBS3 891 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 KREMEN2Q8NCW0 462 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 SPPL2BQ8TCT7 592 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 SLC22A17Q8WUG5 538 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 MYLPFQ96A32 169 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 LPIN3Q9BQK8 851 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 MED10Q9BTT4 135 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 CYP4F11Q9HBI6 524 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 FAM49BQ9NUQ9 324 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 TMLHEQ9NVH6 421 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 FBXW11Q9UKB1 542 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 MAFFQ9ULX9 164 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 ATP8B3O60423 1300 aa15.49■□□□□ 0.07
BRCA1-223ENST00000494123 F8VZ95 297 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 FOXN3O00409 490 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-223ENST00000494123 NCK2O43639 380 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 PAEPP09466 180 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 CCDC85BQ15834 202 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-223ENST00000494123 CCDC142Q17RM4 750 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 SGO2Q562F6 1265 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 SPECC1LQ69YQ0 1117 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 LILRA6Q6PI73 481 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 EP400NLQ6ZTU2 488 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 C12orf29Q8N999 325 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 ATAD1Q8NBU5 361 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 PPM1EQ8WY54 764 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 CASP10Q92851 521 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 IQCDQ96DY2 449 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 PCED1BQ96HM7 432 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 PKMYT1Q99640 499 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 PLEKHA4Q9H4M7 779 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 MAN1C1Q9NR34 630 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 CNTN6Q9UQ52 1028 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.48■□□□□ 0.077e-6■■□□□ 12.1
BRCA1-223ENST00000494123 ITIH6Q6UXX5 1313 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 SZT2Q5T011 3432 aa15.48■□□□□ 0.07
BRCA1-223ENST00000494123 PNMA6AP0CW24 399 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-223ENST00000494123 CCDC130P13994 396 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 STAT1P42224 750 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 ZNF75DP51815 510 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 ZNF132P52740 706 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 DUSP4Q13115 394 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 FIGNQ5HY92 759 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 SMYD5Q6GMV2 418 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 CCDC149Q6ZUS6 474 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 VSTM4Q8IW00 320 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 SLC2A14Q8TDB8 520 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 CYFIP2Q96F07 1278 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 FUBP3Q96I24 572 aaKnown RBP eCLIP15.47■□□□□ 0.07
BRCA1-223ENST00000494123 SEPT5Q99719 369 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-223ENST00000494123 KIAA1257Q9ULG3 409 aa15.47■□□□□ 0.07
BRCA1-223ENST00000494123 MTCL1Q9Y4B5 1905 aaKnown RBP15.47■□□□□ 0.07
BRCA1-223ENST00000494123 RNF225M0QZC1 329 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms