RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 TGS1Q96RS0 853 aaKnown RBP14.86□□□□□ -0.03
SMAD9-204ENST00000483941 OXCT2Q9BYC2 517 aaPredicted RBP14.86□□□□□ -0.03
SMAD9-204ENST00000483941 RNF19AQ9NV58 838 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 NAGPAQ9UK23 515 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 NOCTQ9UK39 431 aaKnown RBP14.86□□□□□ -0.03
SMAD9-204ENST00000483941 FAN1Q9Y2M0 1017 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 PCDHA13Q9Y5I0 950 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 MICAL3Q7RTP6 2002 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 TTC3P53804 2025 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 NLRC5Q86WI3 1866 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 A8MXQ7 604 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 M0QZQ0 153 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 PPEF2O14830 753 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 ZNF500O60304 480 aaPredicted RBP14.85□□□□□ -0.03
SMAD9-204ENST00000483941 UPP2O95045 317 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 CD19P15391 556 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 PCSK1P29120 753 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 ALDH7A1P49419 539 aaKnown RBP14.85□□□□□ -0.03
SMAD9-204ENST00000483941 VAV2P52735 878 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 NDST1P52848 882 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 RAD23BP54727 409 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 CDH8P55286 799 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 ERVK-21P61565 698 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 GFPT1Q06210 699 aaPredicted RBP14.85□□□□□ -0.03
SMAD9-204ENST00000483941 MTF1Q14872 753 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 SGO2Q562F6 1265 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 PTCRAQ6ISU1 281 aaPredicted RBP14.85□□□□□ -0.03
SMAD9-204ENST00000483941 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.85□□□□□ -0.03
SMAD9-204ENST00000483941 NOP9Q86U38 636 aaKnown RBP14.85□□□□□ -0.03
SMAD9-204ENST00000483941 CMTR2Q8IYT2 770 aaKnown RBP14.85□□□□□ -0.03
SMAD9-204ENST00000483941 SLC30A5Q8TAD4 765 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 ZNF606Q8WXB4 792 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 SUSD3Q96L08 255 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 NOX5Q96PH1 765 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 MIS12Q9H081 205 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 AAASQ9NRG9 546 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 PCDHGC3Q9UN70 934 aa14.85□□□□□ -0.03
SMAD9-204ENST00000483941 A0A087X0T9 212 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 LINC01553A4QN01 128 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 SYN3O14994 580 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 SPTLC1O15269 473 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 DCXO43602 365 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 RTN2O75298 545 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 GJB5O95377 273 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 CYP11A1P05108 521 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 H2AFZP0C0S5 128 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 FAM228BP0C875 321 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 MYBL1P10243 752 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 RAP1GAPP47736 663 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 SLC8A3P57103 927 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 MAPRE1Q15691 268 aaKnown RBP14.84□□□□□ -0.03
SMAD9-204ENST00000483941 CNGA2Q16280 664 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 IFI16Q16666 785 aaKnown RBP14.84□□□□□ -0.03
SMAD9-204ENST00000483941 TCTN1Q2MV58 587 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 H2AFVQ71UI9 128 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 ZNF280BQ86YH2 543 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 GLYCTKQ8IVS8 523 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 CRYBG2Q8N1P7 616 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 PDCL2Q8N4E4 241 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 TMEM35BQ8NCS4 154 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 DDX1Q92499 740 aaKnown RBP14.84□□□□□ -0.03
SMAD9-204ENST00000483941 ELMO3Q96BJ8 720 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 RAD9AQ99638 391 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 SYT11Q9BT88 431 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 SDCBP2Q9H190 292 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 KCNH6Q9H252 994 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 LHX5Q9H2C1 402 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 NRDE2Q9H7Z3 1164 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 SPTLC3Q9NUV7 552 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.84□□□□□ -0.03
SMAD9-204ENST00000483941 MYO1AQ9UBC5 1043 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 PCDHB8Q9UN66 801 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 CFAP54Q96N23 3096 aa14.84□□□□□ -0.03
SMAD9-204ENST00000483941 PDCD11Q14690 1871 aaKnown RBP14.84□□□□□ -0.03
SMAD9-204ENST00000483941 DDX3XO00571 662 aaKnown RBP eCLIP14.83□□□□□ -0.041e-6■■□□□ 13.3
SMAD9-204ENST00000483941 GABRDO14764 452 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 DDHD2O94830 711 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 NSFP46459 744 aaKnown RBP14.83□□□□□ -0.04
SMAD9-204ENST00000483941 FMO1Q01740 532 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 PUS10Q3MIT2 529 aaKnown RBP14.83□□□□□ -0.04
SMAD9-204ENST00000483941 TIGD5Q53EQ6 642 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 ZNF394Q53GI3 561 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 TAF3Q5VWG9 929 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 SCARA3Q6AZY7 606 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 ACAD10Q6JQN1 1059 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 RNF10Q8N5U6 811 aaKnown RBP14.83□□□□□ -0.04
SMAD9-204ENST00000483941 SLC4A11Q8NBS3 891 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 ACRBPQ8NEB7 543 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 UBE2Q2Q8WVN8 375 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 CTNNBL1Q8WYA6 563 aaPredicted RBP14.83□□□□□ -0.04
SMAD9-204ENST00000483941 VCPIP1Q96JH7 1222 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 YME1L1Q96TA2 773 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 MRPL45Q9BRJ2 306 aaKnown RBP14.83□□□□□ -0.04
SMAD9-204ENST00000483941 DESI2Q9BSY9 194 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 TRMT1Q9NXH9 659 aaKnown RBP14.83□□□□□ -0.04
SMAD9-204ENST00000483941 HESX1Q9UBX0 185 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 ADAM28Q9UKQ2 775 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 CDH9Q9ULB4 789 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 L1RE1Q9UN81 338 aa14.83□□□□□ -0.04
SMAD9-204ENST00000483941 ATG2AQ2TAZ0 1938 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms