RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 GDF15Q99988 308 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 MENTQ9BUN1 341 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 SLC13A1Q9BZW2 595 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 IL1RAPL2Q9NP60 686 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 RIC8AQ9NPQ8 531 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 RBPJLQ9UBG7 517 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 WASF3Q9UPY6 502 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 COA3Q9Y2R0 106 aaPredicted RBP7.44□□□□□ -1.22
CLK1-212ENST00000482590 PFASO15067 1338 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 TCRBV5S2A0A599 114 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 SUSD5O60279 629 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 MSCO60682 206 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 DNAJC8O75937 253 aaPredicted RBP7.43□□□□□ -1.22
CLK1-212ENST00000482590 SCG5P05408 212 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 LPOP22079 712 aaPredicted RBP7.43□□□□□ -1.22
CLK1-212ENST00000482590 HOXC12P31275 282 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 SHMT1P34896 483 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 ACVRL1P37023 503 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 ECI1P42126 302 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 GDF5P43026 501 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 EPHB4P54760 987 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 AK2P54819 239 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 TMPRSS15P98073 1019 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 KCNAB2Q13303 367 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 CCL14Q16627 93 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 ARHGAP29Q52LW3 1261 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 WDR45BQ5MNZ6 344 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 MFSD14CQ5VZR4 134 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 TSHZ3Q63HK5 1081 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 XRRA1Q6P2D8 792 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 TEPPQ6URK8 271 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 CATSPERGQ6ZRH7 1159 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 SRLQ86TD4 932 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 TDHQ8IZJ6 230 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 COG1Q8WTW3 980 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 ZCCHC14Q8WYQ9 949 aaKnown RBP7.43□□□□□ -1.22
CLK1-212ENST00000482590 KIF1BPQ96EK5 621 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 EDC3Q96F86 508 aaKnown RBP7.43□□□□□ -1.22
CLK1-212ENST00000482590 TTC1Q99614 292 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 RIOK1Q9BRS2 568 aaKnown RBP7.43□□□□□ -1.22
CLK1-212ENST00000482590 KIAA1683Q9H0B3 1180 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 RPAP3Q9H6T3 665 aaPredicted RBP7.43□□□□□ -1.22
CLK1-212ENST00000482590 SH2D4AQ9H788 454 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 MCM9Q9NXL9 1143 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 COL6A3P12111 3177 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 ZBED9Q6R2W3 1325 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 CUL9Q8IWT3 2517 aa7.43□□□□□ -1.22
CLK1-212ENST00000482590 SLC15A5A6NIM6 579 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 F5H423 210 aaPredicted RBP7.42□□□□□ -1.22
CLK1-212ENST00000482590 GOLIM4O00461 696 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 MEFVO15553 781 aaPredicted RBP7.42□□□□□ -1.22
CLK1-212ENST00000482590 TADA3O75528 432 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 CNMDO75829 334 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 AGR2O95994 175 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 LRG1P02750 347 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 ITGAVP06756 1048 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 SNRPB2P08579 225 aaKnown RBP7.42□□□□□ -1.22
CLK1-212ENST00000482590 TGFB3P10600 412 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 PF4V1P10720 104 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 PDE6AP16499 860 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 BPIP17213 487 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 RXRGP48443 463 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 PLCD1P51178 756 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 HMGA2P52926 109 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 PPP2CBP62714 309 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 PPP2CAP67775 309 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 NUCB1Q02818 461 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 GRB14Q14449 540 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 SEPT2Q15019 361 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 TESK1Q15569 626 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 SF1Q15637 639 aaKnown RBP7.42□□□□□ -1.22
CLK1-212ENST00000482590 SEPT7Q16181 437 aaKnown RBP7.42□□□□□ -1.22
CLK1-212ENST00000482590 FAM209AQ5JX71 171 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 TMEM240Q5SV17 173 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 SLC9C2Q5TAH2 1124 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 STEAP3Q658P3 488 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 LBX2Q6XYB7 198 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 CIR1Q86X95 450 aaPredicted RBP7.42□□□□□ -1.22
CLK1-212ENST00000482590 KBTBD2Q8IY47 623 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 ACER1Q8TDN7 264 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 PARD3BQ8TEW8 1205 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLK1-212ENST00000482590 SDR42E1Q8WUS8 393 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 USP6NLQ92738 828 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 ZNF747Q9BV97 191 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 IFT22Q9H7X7 185 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 DDX20Q9UHI6 824 aaKnown RBP7.42□□□□□ -1.22
CLK1-212ENST00000482590 CROTQ9UKG9 612 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 DDX19BQ9UMR2 479 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 GIT1Q9Y2X7 761 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 PCDHB4Q9Y5E5 795 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 ZNF532Q9HCE3 1301 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 GBF1Q92538 1859 aa7.42□□□□□ -1.22
CLK1-212ENST00000482590 LRRC37A2A6NM11 1700 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 K7ESF4 209 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 ZEB2O60315 1214 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 SNUPNO95149 360 aaKnown RBP7.41□□□□□ -1.22
CLK1-212ENST00000482590 LCP1P13796 627 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 GUCY1A2P33402 732 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 ICA1Q05084 483 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms