RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, human

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-213	ENST00000454132	LIN9	Q5TKA1	542 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	TDRP	Q86YL5	185 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	IGDCC3	Q8IVU1	814 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	EXD1	Q8NHP7	514 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	B4GALNT2	Q8NHY0	566 aa		20.6	■□□□□ 0.89
LMBR1-213	ENST00000454132	MT-ND3	P03897	115 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	LYN	P07948	512 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	VIL1	P09327	827 aa	Known RBP	20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	MYBPC2	Q14324	1141 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	USP6NL	Q92738	828 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	OXNAD1	Q96HP4	312 aa	Predicted RBP	20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	SHCBP1L	Q9BZQ2	653 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	PSTPIP1	O43586	416 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	AVIL	O75366	819 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	SPATA31D3	P0C874	917 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	IRX4	P78413	519 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	USP4	Q13107	963 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	BRDT	Q58F21	947 aa	Predicted RBP	20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	SPATA31D4	Q6ZUB0	917 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	CPXCR1	Q8N123	301 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	EFCAB3	Q8N7B9	438 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	BANP	Q8N9N5	519 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	RBM15B	Q8NDT2	890 aa	Known RBP	20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	ARHGEF4	Q9NR80	690 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	SENP1	Q9P0U3	644 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	STX18	Q9P2W9	335 aa	Known RBP	20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	PCDHB2	Q9Y5E7	798 aa		20.59	■□□□□ 0.89
LMBR1-213	ENST00000454132	PCNT	O95613	3336 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	SORBS2	O94875	1100 aa	Known RBP	20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	DLD	P09622	509 aa	Known RBP	20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	GNA15	P30679	374 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	ALDH18A1	P54886	795 aa	Known RBP	20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	RTP1	P59025	263 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	OGDH	Q02218	1023 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	CYP24A1	Q07973	514 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	FAAP100	Q0VG06	881 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	TRAF1	Q13077	416 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	CRY2	Q49AN0	593 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	EFHC2	Q5JST6	749 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	RIPOR1	Q6ZS17	1223 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	LRRN4	Q8WUT4	740 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	EZH1	Q92800	747 aa	Predicted RBP	20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	SKA1	Q96BD8	255 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	MXRA8	Q9BRK3	442 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	PPM1H	Q9ULR3	514 aa		20.58	■□□□□ 0.89
LMBR1-213	ENST00000454132	STK10	O94804	968 aa	Known RBP	20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	BASP1	P80723	227 aa	Known RBP	20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	MCL1	Q07820	350 aa		20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	CYP4A22	Q5TCH4	519 aa		20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	CDHR3	Q6ZTQ4	885 aa		20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	OGFOD1	Q8N543	542 aa		20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	TMEM161B	Q8NDZ6	487 aa		20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	GMCL1P1	Q8NEA9	526 aa		20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	JDP2	Q8WYK2	163 aa		20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	SLC13A1	Q9BZW2	595 aa		20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	KMT5A	Q9NQR1	393 aa		20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	AVEN	Q9NQS1	362 aa	Predicted RBP	20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	COL16A1	Q07092	1604 aa	Predicted RBP	20.58	■□□□□ 0.88
LMBR1-213	ENST00000454132	CYB561D2	O14569	222 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	ABLIM1	O14639	778 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	MYCL	P12524	364 aa	Predicted RBP	20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	QARS	P47897	775 aa	Known RBP	20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	CUL3	Q13618	768 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	SPOCD1	Q6ZMY3	1216 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	PANX3	Q96QZ0	392 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	SMYD3	Q9H7B4	428 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	DCAF8L1	A6NGE4	600 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	HARS	P12081	509 aa	Known RBP	20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	ZNF252P-AS1	Q0IIN9	211 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	MORF4L2	Q15014	288 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	ARID3B	Q8IVW6	561 aa	Predicted RBP	20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	COQ4	Q9Y3A0	265 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	PTPRJ	Q12913	1337 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	NFIB	O00712	420 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	HLA-DRA	P01903	254 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	RARB	P10826	455 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	ANPEP	P15144	967 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	NOMO3	P69849	1222 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	CNPY1	Q3B7I2	92 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	CMPK2	Q5EBM0	449 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	TATDN1	Q6P1N9	297 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	DCUN1D2	Q6PH85	259 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	FEZF2	Q8TBJ5	459 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	DCAKD	Q8WVC6	231 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	CPT1B	Q92523	772 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	ACAP3	Q96P50	834 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	FNBP1	Q96RU3	617 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	CSRNP1	Q96S65	589 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	TCEAL9	Q9UHQ7	104 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	SLC24A2	Q9UI40	661 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	TELO2	Q9Y4R8	837 aa		20.57	■□□□□ 0.88
LMBR1-213	ENST00000454132	TMEM63A	O94886	807 aa		20.56	■□□□□ 0.88
LMBR1-213	ENST00000454132	EIF2AK2	P19525	551 aa	Known RBP	20.56	■□□□□ 0.88
LMBR1-213	ENST00000454132	PTK7	Q13308	1070 aa		20.56	■□□□□ 0.88
LMBR1-213	ENST00000454132	SMAD1	Q15797	465 aa	Known RBP	20.56	■□□□□ 0.88
LMBR1-213	ENST00000454132	B3GNT9	Q6UX72	402 aa		20.56	■□□□□ 0.88
LMBR1-213	ENST00000454132	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	20.56	■□□□□ 0.88
LMBR1-213	ENST00000454132	LDHD	Q86WU2	507 aa		20.56	■□□□□ 0.88
LMBR1-213	ENST00000454132	CTAGE3P	Q8IX95	158 aa		20.56	■□□□□ 0.88
LMBR1-213	ENST00000454132	PYDC1	Q8WXC3	89 aa		20.56	■□□□□ 0.88

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