RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 HMGB1P1B2RPK0 211 aaPredicted RBP20.61■□□□□ 0.89
FAM3A-215ENST00000447601 IGHA2P01877 340 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 MYZAPP0CAP1 466 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 IRX5P78411 483 aaPredicted RBP20.61■□□□□ 0.89
FAM3A-215ENST00000447601 CALCOCO2Q13137 446 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 HIC1Q14526 733 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 SNX17Q15036 470 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 STILQ15468 1287 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 ZFYVE27Q5T4F4 411 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 XYLT1Q86Y38 959 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 ATL2Q8NHH9 583 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 PPP1R13LQ8WUF5 828 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 ART4Q93070 314 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 CNTN3Q9P232 1028 aa20.61■□□□□ 0.89
FAM3A-215ENST00000447601 TREHO43280 583 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 PSMA2P25787 234 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 GABRB2P47870 512 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 EIF3BP55884 814 aaKnown RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 BEX3Q00994 111 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 PDCLQ13371 301 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 PTK6Q13882 451 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 ZBTB6Q15916 424 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 FSCN1Q16658 493 aaKnown RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 POLNQ7Z5Q5 900 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 NME8Q8N427 588 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 IPO4Q8TEX9 1081 aaKnown RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 RNF25Q96BH1 459 aaPredicted RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 ATP6V1G3Q96LB4 118 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 ZMAT2Q96NC0 199 aaKnown RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 SLITRK1Q96PX8 696 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 MIS12Q9H081 205 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 WHRNQ9P202 907 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 PIN4Q9Y237 131 aaKnown RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 R3HDM2Q9Y2K5 976 aaKnown RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 ERBB2P04626 1255 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 AKR1A1P14550 325 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 ATF7P17544 494 aaPredicted RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 PTPN7P35236 360 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 RFC1P35251 1148 aaPredicted RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 GPD2P43304 727 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 PMS2P54278 862 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 ZNF844Q08AG5 666 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 SREBF2Q12772 1141 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 LCLAT1Q6UWP7 414 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 CCDC114Q96M63 670 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 TSPAN18Q96SJ8 248 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 NXF3Q9H4D5 531 aaKnown RBP20.6■□□□□ 0.89
FAM3A-215ENST00000447601 TMBIM4Q9HC24 238 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 ASIC3Q9UHC3 531 aa20.6■□□□□ 0.89
FAM3A-215ENST00000447601 RECQL4O94761 1208 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 TJP3O95049 919 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 TCF4P15884 667 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 CRYBB1P53674 252 aaPredicted RBP20.59■□□□□ 0.89
FAM3A-215ENST00000447601 SLMAPQ14BN4 828 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 ALKAL1Q6UXT8 129 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 LEKR1Q6ZMV7 388 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 C7orf31Q8N865 590 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 PABPC3Q9H361 631 aaKnown RBP20.59■□□□□ 0.89
FAM3A-215ENST00000447601 TJP2Q9UDY2 1190 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 TUBGCP4Q9UGJ1 667 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 UBQLN1Q9UMX0 589 aaKnown RBP20.59■□□□□ 0.89
FAM3A-215ENST00000447601 HES2Q9Y543 173 aa20.59■□□□□ 0.89
FAM3A-215ENST00000447601 ERICH4A6NGS2 130 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 ITIH2P19823 946 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 PURAQ00577 322 aaKnown RBP20.58■□□□□ 0.89
FAM3A-215ENST00000447601 LMNB2Q03252 620 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 HADHQ16836 314 aaKnown RBP20.58■□□□□ 0.89
FAM3A-215ENST00000447601 ATP13A4Q4VNC1 1196 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 KCTD16Q68DU8 428 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 SPOCD1Q6ZMY3 1216 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 TMEM40Q8WWA1 233 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 MCRS1Q96EZ8 462 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 METTL5Q9NRN9 209 aaKnown RBP20.58■□□□□ 0.89
FAM3A-215ENST00000447601 KLHL11Q9NVR0 708 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 SNX9Q9Y5X1 595 aa20.58■□□□□ 0.89
FAM3A-215ENST00000447601 A6NNZ2 444 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 PI4K2BG5E9Z4 385 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 XPOTO43592 962 aaKnown RBP20.57■□□□□ 0.88
FAM3A-215ENST00000447601 KPNA6O60684 536 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 CD4P01730 458 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 KRT7P08729 469 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 HOXC8P31273 242 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 ACTN2P35609 894 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 ZNF200P98182 395 aaPredicted RBP20.57■□□□□ 0.88
FAM3A-215ENST00000447601 CRHR2Q13324 411 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 TUBB8Q3ZCM7 444 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 DPH6Q7L8W6 267 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 OR2W6PQ8NHA6 318 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 JOSD2Q8TAC2 188 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 SNF8Q96H20 258 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 TSPAN16Q9UKR8 245 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 SHOX2O60902 331 aaPredicted RBP20.57■□□□□ 0.88
FAM3A-215ENST00000447601 NUDT17P0C025 328 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 SKOR1P84550 965 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 CAV1Q03135 178 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 IFFO1Q0D2I5 559 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 ACAP1Q15027 740 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 TFDP3Q5H9I0 405 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 MFSD7Q6UXD7 560 aa20.57■□□□□ 0.88
FAM3A-215ENST00000447601 ZNF365Q70YC5 407 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms