RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SLMAPQ14BN4 828 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 TXNRD3NBQ6F5E7 133 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 DPH6Q7L8W6 267 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 TLK2Q86UE8 772 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 CCDC25Q86WR0 208 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 KAT2BQ92831 832 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 SNF8Q96H20 258 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 HEXIM2Q96MH2 286 aaKnown RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 OSMRQ99650 979 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 CDHR5Q9HBB8 845 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 LRRC4CQ9HCJ2 640 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 DDX56Q9NY93 547 aaKnown RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 SNTG2Q9NY99 539 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 CWC15Q9P013 229 aaKnown RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 BARX2Q9UMQ3 279 aaPredicted RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 DOCK3Q8IZD9 2030 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 NRCAMQ92823 1304 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 EIF3HO15372 352 aaKnown RBP eCLIP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 STAU1O95793 577 aaKnown RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 ATF2P15336 505 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 RFC1P35251 1148 aaPredicted RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 NDST1P52848 882 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 INCA1Q0VD86 236 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 MFSD10Q14728 455 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 CST9Q5W186 159 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 SLC27A1Q6PCB7 646 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 SPOCD1Q6ZMY3 1216 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 HOOK3Q86VS8 718 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 XYLT1Q86Y38 959 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 JOSD2Q8TAC2 188 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 ACSF2Q96CM8 615 aaPredicted RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 EIF2AQ9BY44 585 aaKnown RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 SEMA4AQ9H3S1 761 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 METTL5Q9NRN9 209 aaKnown RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 WDR35Q9P2L0 1181 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 SMIM35A0A1B0GVV1 85 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 A6NNZ2 444 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 IGF2BP3O00425 579 aaKnown RBP eCLIP14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 TJP3O95049 919 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 ITIH2P19823 946 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 HOXA11P31270 313 aaPredicted RBP14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 ADCY8P40145 1251 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 VPS41P49754 854 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 GSCP56915 257 aaPredicted RBP14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 IRX5P78411 483 aaPredicted RBP14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 CDC42EP1Q00587 391 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 ADCY2Q08462 1091 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 MYO1EQ12965 1108 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 TUBB8Q3ZCM7 444 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 EMC10Q5UCC4 262 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 OLFML2BQ68BL8 750 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 NOTUMQ6P988 496 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 SNX27Q96L92 541 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 CXCL16Q9H2A7 254 aa14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 NOVA2Q9UNW9 492 aaKnown RBP14.77□□□□□ -0.04
APOBEC3D-202ENST00000427494 SRCAPQ6ZRS2 3230 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 LRRD1A4D1F6 860 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 HMGCRP04035 888 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 ZNF865P0CJ78 1059 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 RARGP13631 454 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 IVDP26440 423 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 ITGA8P53708 1063 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 COPS2P61201 443 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 GUCY1A3Q02108 690 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 SLC29A2Q14542 456 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 ZNF268Q14587 947 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 TAF1CQ15572 869 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 CNGA2Q16280 664 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 CCL14Q16627 93 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 UBAP2Q5T6F2 1119 aaKnown RBP14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 FOXR1Q6PIV2 292 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 ZNF365Q70YC5 407 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 GSTA5Q7RTV2 222 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 TTC39CQ8N584 583 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 ARFGAP2Q8N6H7 521 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 RAPGEF5Q92565 580 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 PLEKHA5Q9HAU0 1116 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 DERAQ9Y315 318 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 NEU2Q9Y3R4 380 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 hCG_1818297A0A087WSY0 165 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 MBLAC1A4D2B0 266 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 TP73O15350 636 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 RIPK2O43353 540 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 MYL3P08590 195 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 DARSP14868 501 aaKnown RBP14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 PTPN7P35236 360 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 PSEN2P49810 448 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 YARSP54577 528 aaKnown RBP14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 TFDP3Q5H9I0 405 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 RASAL3Q86YV0 1011 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 EMC1Q8N766 993 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 UHMK1Q8TAS1 419 aaKnown RBP14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 UBA3Q8TBC4 463 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 ZMAT2Q96NC0 199 aaKnown RBP14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 ZWILCHQ9H900 591 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 TUBGCP4Q9UGJ1 667 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 HES2Q9Y543 173 aa14.76□□□□□ -0.05
APOBEC3D-202ENST00000427494 LIASO43766 372 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 ITGBL1O95965 494 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms