RNA–Protein interactions for RNA: ENST00000403974.6

PMS2CL-202, Transcript of PMS2 C-terminal like pseudogene, humanhuman

BASIC

Gene PMS2CL, Length 1,529 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-202ENST00000403974 CES5AQ6NT32 575 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 SYCE2Q6PIF2 218 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 CCDC149Q6ZUS6 474 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 LIMS2Q7Z4I7 341 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 VSTM4Q8IW00 320 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 NEK11Q8NG66 645 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 SLC7A14Q8TBB6 771 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 HDAC7Q8WUI4 952 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 MSLNLQ96KJ4 702 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 SYT15Q9BQS2 421 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 ACBD6Q9BR61 282 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 NIF3L1Q9GZT8 377 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 SDCBP2Q9H190 292 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 SFXN1Q9H9B4 322 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 SIX2Q9NPC8 291 aa13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 FAM207AQ9NSI2 230 aaPredicted RBP13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 AFF4Q9UHB7 1163 aaKnown RBP13.21□□□□□ -0.29
PMS2CL-202ENST00000403974 CCDC195A0A1B0GUA6 201 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 ATP2C2O75185 946 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 SEC24AO95486 1093 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 ATF2P15336 505 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 TRIM21P19474 475 aaKnown RBP13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 TBXAS1P24557 533 aaPredicted RBP13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 ASPAP45381 313 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 KLK7P49862 253 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 MRPS5P82675 430 aaKnown RBP13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 GCNT1Q02742 428 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 PTPN21Q16825 1174 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 INTS6LQ5JSJ4 861 aaKnown RBP13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 SPECC1LQ69YQ0 1117 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 LRRTM3Q86VH5 581 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 ATAD1Q8NBU5 361 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 IQCDQ96DY2 449 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 GANQ9H2C0 597 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 CYP3A43Q9HB55 503 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 PIDD1Q9HB75 910 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 ABI2Q9NYB9 513 aaPredicted RBP13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 GTF3C4Q9UKN8 822 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 CDH9Q9ULB4 789 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 SLC27A5Q9Y2P5 690 aa13.2□□□□□ -0.3
PMS2CL-202ENST00000403974 MTMR11A4FU01 709 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 CCL16O15467 120 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 ZMYND10O75800 440 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 UCHL3P15374 230 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 KCNQ1P51787 676 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 DUSP4Q13115 394 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 ORC1Q13415 861 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 TRIM14Q14142 442 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 KLHDC7AQ5VTJ3 777 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 PTCRAQ6ISU1 281 aaPredicted RBP13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 PHLDB3Q6NSJ2 640 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 DPY19L2P1Q6NXN4 242 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 ENOSF1Q7L5Y1 443 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 PPM1KQ8N3J5 372 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 ANP32BQ92688 251 aaKnown RBP13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 NUP58Q9BVL2 599 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 ADAM7Q9H2U9 754 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 DPEP3Q9H4B8 488 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 FAM124BQ9H5Z6 455 aaPredicted RBP13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 TMLHEQ9NVH6 421 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 PCDHB5Q9Y5E4 795 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 COL6A3P12111 3177 aa13.19□□□□□ -0.3
PMS2CL-202ENST00000403974 MYBPHLA2RUH7 354 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 MBTPS2O43462 519 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 NOL4O94818 638 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SLC34A2O95436 690 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 LRG1P02750 347 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 PTPN1P18031 435 aaKnown RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 NDST1P52848 882 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 APBA1Q02410 837 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ITIH3Q06033 890 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SMAD4Q13485 552 aaKnown RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 CUL2Q13617 745 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 NFE2Q16621 373 aaPredicted RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 CCDC142Q17RM4 750 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 MGAT5BQ3V5L5 792 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 MDH1BQ5I0G3 518 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ATAT1Q5SQI0 421 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SPATA2LQ8IUW3 424 aaPredicted RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ARHGEF19Q8IW93 802 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 TCEAL8Q8IYN2 117 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SMG7Q92540 1137 aaKnown RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 JAKMIP2Q96AA8 810 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SEPT5Q99719 369 aaPredicted RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 LPIN3Q9BQK8 851 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 TTYH3Q9C0H2 523 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 S1PR5Q9H228 398 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ZDHHC7Q9NXF8 308 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 CEP72Q9P209 647 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms