RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 RNF19AQ9NV58 838 aa26.3■■□□□ 1.8
CLK2-203ENST00000368361 PARP2Q9UGN5 583 aa26.3■■□□□ 1.8
CLK2-203ENST00000368361 TNPO2O14787 897 aaKnown RBP26.3■■□□□ 1.8
CLK2-203ENST00000368361 GPD2P43304 727 aa26.3■■□□□ 1.8
CLK2-203ENST00000368361 YARSP54577 528 aaKnown RBP26.3■■□□□ 1.8
CLK2-203ENST00000368361 ADCY2Q08462 1091 aa26.3■■□□□ 1.8
CLK2-203ENST00000368361 MYO1EQ12965 1108 aa26.3■■□□□ 1.8
CLK2-203ENST00000368361 SNX17Q15036 470 aa26.3■■□□□ 1.8
CLK2-203ENST00000368361 PCBP1Q15365 356 aaKnown RBP eCLIP26.3■■□□□ 1.86e-6■□□□□ 8.7
CLK2-203ENST00000368361 CNGA2Q16280 664 aa26.3■■□□□ 1.8
CLK2-203ENST00000368361 TRIM6Q9C030 488 aaPredicted RBP26.3■■□□□ 1.8
CLK2-203ENST00000368361 DERAQ9Y315 318 aa26.3■■□□□ 1.8
CLK2-203ENST00000368361 HMGCRP04035 888 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 DNAJC21Q5F1R6 531 aaKnown RBP26.29■■□□□ 1.8
CLK2-203ENST00000368361 LRRC38Q5VT99 294 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 RCOR2Q8IZ40 523 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 ART4Q93070 314 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 C18orf25Q96B23 403 aaPredicted RBP26.29■■□□□ 1.8
CLK2-203ENST00000368361 SLITRK1Q96PX8 696 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 PIN4Q9Y237 131 aaKnown RBP26.29■■□□□ 1.8
CLK2-203ENST00000368361 IGHA2P01877 340 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 KRT1P04264 644 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 KRT10P13645 584 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 PDCLQ13371 301 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 ZBTB6Q15916 424 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 UBA3Q8TBC4 463 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 SOCS4Q8WXH5 440 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 ACSF2Q96CM8 615 aaPredicted RBP26.29■■□□□ 1.8
CLK2-203ENST00000368361 RBM41Q96IZ5 413 aaKnown RBP26.29■■□□□ 1.8
CLK2-203ENST00000368361 APOL6Q9BWW8 343 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 TMBIM4Q9HC24 238 aa26.29■■□□□ 1.8
CLK2-203ENST00000368361 METTL5Q9NRN9 209 aaKnown RBP26.29■■□□□ 1.8
CLK2-203ENST00000368361 RECQL4O94761 1208 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 SLC10A3P09131 477 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 AKAP5P24588 427 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 PSMA2P25787 234 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 GSCP56915 257 aaPredicted RBP26.28■■□□□ 1.8
CLK2-203ENST00000368361 MFSD7Q6UXD7 560 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 ATP6V1G3Q96LB4 118 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 CCDC114Q96M63 670 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 NT5C1AQ9BXI3 368 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 EPB41L4BQ9H329 900 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 Q9Y3F1 56 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 SNX9Q9Y5X1 595 aa26.28■■□□□ 1.8
CLK2-203ENST00000368361 ATF7P17544 494 aaPredicted RBP26.27■■□□□ 1.8
CLK2-203ENST00000368361 CYP3A5P20815 502 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 CTGFP29279 349 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 PMS2P54278 862 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 CCNG2Q16589 344 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 FSCN1Q16658 493 aaKnown RBP26.27■■□□□ 1.8
CLK2-203ENST00000368361 SPDYCQ5MJ68 293 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 KAZNQ674X7 775 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 ALKAL1Q6UXT8 129 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 EMC1Q8N766 993 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 C12orf29Q8N999 325 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 ATL2Q8NHH9 583 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 ZFYVE28Q9HCC9 887 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 HOMER3Q9NSC5 361 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 WDR35Q9P2L0 1181 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 MTRF1LQ9UGC7 380 aaKnown RBP26.27■■□□□ 1.8
CLK2-203ENST00000368361 GOLGA6L10A6NI86 522 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 MYZAPP0CAP1 466 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 CRHR2Q13324 411 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 TRIP13Q15645 432 aaPredicted RBP26.27■■□□□ 1.8
CLK2-203ENST00000368361 GRK7Q8WTQ7 553 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 RAPGEF5Q92565 580 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 MRPL45Q9BRJ2 306 aaKnown RBP26.27■■□□□ 1.8
CLK2-203ENST00000368361 CENPHQ9H3R5 247 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 FAM124BQ9H5Z6 455 aaPredicted RBP26.27■■□□□ 1.8
CLK2-203ENST00000368361 CNTN3Q9P232 1028 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 ASIC3Q9UHC3 531 aa26.27■■□□□ 1.8
CLK2-203ENST00000368361 C17orf102A2RUQ5 167 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 TP73O15350 636 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 CETN2P41208 172 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 GABRB2P47870 512 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 PURAQ00577 322 aaKnown RBP26.26■■□□□ 1.79
CLK2-203ENST00000368361 PTK6Q13882 451 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 ZNF268Q14587 947 aaPredicted RBP26.26■■□□□ 1.79
CLK2-203ENST00000368361 ARFGAP1Q8N6T3 406 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 KATNAL1Q9BW62 490 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 TSPAN16Q9UKR8 245 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 AXLP30530 894 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 CALCOCO2Q13137 446 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 SYDE1Q6ZW31 735 aaPredicted RBP26.26■■□□□ 1.79
CLK2-203ENST00000368361 TTC39CQ8N584 583 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 BEST2Q8NFU1 509 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 FNIP1Q8TF40 1166 aa26.26■■□□□ 1.79
CLK2-203ENST00000368361 PABPC3Q9H361 631 aaKnown RBP26.26■■□□□ 1.79
CLK2-203ENST00000368361 FEZ2Q9UHY8 353 aaPredicted RBP26.26■■□□□ 1.79
CLK2-203ENST00000368361 LRCH4O75427 683 aa26.25■■□□□ 1.79
CLK2-203ENST00000368361 GAS8O95995 478 aa26.25■■□□□ 1.79
CLK2-203ENST00000368361 SPOCD1Q6ZMY3 1216 aa26.25■■□□□ 1.79
CLK2-203ENST00000368361 LRRC4CQ9HCJ2 640 aa26.25■■□□□ 1.79
CLK2-203ENST00000368361 MYADML2A6NDP7 307 aa26.24■■□□□ 1.79
CLK2-203ENST00000368361 HMGB1P1B2RPK0 211 aaPredicted RBP26.24■■□□□ 1.79
CLK2-203ENST00000368361 IVDP26440 423 aa26.24■■□□□ 1.79
CLK2-203ENST00000368361 ACTN2P35609 894 aa26.24■■□□□ 1.79
CLK2-203ENST00000368361 INHBEP58166 350 aa26.24■■□□□ 1.79
CLK2-203ENST00000368361 SLC25A11Q02978 314 aaKnown RBP26.24■■□□□ 1.79
CLK2-203ENST00000368361 ODF2Q5BJF6 829 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms