RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SLCO4C1Q6ZQN7 724 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 CATSPER4Q7RTX7 472 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 UCN2Q96RP3 112 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 AGPAT5Q9NUQ2 364 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 SCHIP1Q9P0W5 487 aaPredicted RBP12.45□□□□□ -0.42
ATXN3-201ENST00000340660 MTRRQ9UBK8 725 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 ITGA4P13612 1032 aa12.44□□□□□ -0.42
ATXN3-201ENST00000340660 JUPP14923 745 aa12.44□□□□□ -0.42
ATXN3-201ENST00000340660 ZNF33AQ06730 810 aa12.44□□□□□ -0.42
ATXN3-201ENST00000340660 TARDBPQ13148 414 aaKnown RBP eCLIP12.44□□□□□ -0.42
ATXN3-201ENST00000340660 HSP90AA2PQ14568 343 aaPredicted RBP12.44□□□□□ -0.42
ATXN3-201ENST00000340660 ARSJQ5FYB0 599 aaPredicted RBP12.44□□□□□ -0.42
ATXN3-201ENST00000340660 ZNF248Q8NDW4 579 aa12.44□□□□□ -0.42
ATXN3-201ENST00000340660 GSTCDQ8NEC7 633 aa12.44□□□□□ -0.42
ATXN3-201ENST00000340660 ZDHHC1Q8WTX9 485 aa12.44□□□□□ -0.42
ATXN3-201ENST00000340660 GPR88Q9GZN0 384 aa12.44□□□□□ -0.42
ATXN3-201ENST00000340660 CEP72Q9P209 647 aa12.44□□□□□ -0.42
ATXN3-201ENST00000340660 PLXND1Q9Y4D7 1925 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 A0A1W2PQD8 194 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 DDX39AO00148 427 aaKnown RBP12.43□□□□□ -0.42
ATXN3-201ENST00000340660 AP5Z1O43299 807 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 TNFSF14O43557 240 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 KIF4AO95239 1232 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 SEC24AO95486 1093 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 HOXA11P31270 313 aaPredicted RBP12.43□□□□□ -0.42
ATXN3-201ENST00000340660 PSMD2Q13200 908 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 PTPAQ15257 358 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 PLA2G4EQ3MJ16 856 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 SLC41A1Q8IVJ1 513 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 P2RY13Q9BPV8 354 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 POLR3CQ9BUI4 534 aaPredicted RBP12.43□□□□□ -0.42
ATXN3-201ENST00000340660 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.43□□□□□ -0.42
ATXN3-201ENST00000340660 UBN1Q9NPG3 1134 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 MAD2L2Q9UI95 211 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.43□□□□□ -0.42
ATXN3-201ENST00000340660 CEP131Q9UPN4 1083 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 FNDC3AQ9Y2H6 1198 aaKnown RBP12.43□□□□□ -0.42
ATXN3-201ENST00000340660 MAFBQ9Y5Q3 323 aaPredicted RBP12.43□□□□□ -0.42
ATXN3-201ENST00000340660 INSL5Q9Y5Q6 135 aa12.43□□□□□ -0.42
ATXN3-201ENST00000340660 TDRD15B5MCY1 1934 aaKnown RBP12.43□□□□□ -0.42
ATXN3-201ENST00000340660 PRRG1O14668 218 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 FLRT2O43155 660 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 PRAMEF12O95522 483 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 ZNF883P0CG24 379 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 MAPTP10636 758 aaKnown RBP12.42□□□□□ -0.42
ATXN3-201ENST00000340660 HOXB4P17483 251 aaPredicted RBP12.42□□□□□ -0.42
ATXN3-201ENST00000340660 RPL6Q02878 288 aaKnown RBP12.42□□□□□ -0.42
ATXN3-201ENST00000340660 TNP2Q05952 138 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 SCRN1Q12765 414 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 TRAF1Q13077 416 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 RUNX3Q13761 415 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 IGFBP7Q16270 282 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 CRY1Q16526 586 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 TRIM68Q6AZZ1 485 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 USP49Q70CQ1 688 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 BPIFB1Q8TDL5 484 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 HIC2Q96JB3 615 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 FAM83CQ9BQN1 747 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 AGO4Q9HCK5 861 aaKnown RBP12.42□□□□□ -0.42
ATXN3-201ENST00000340660 ASAH2Q9NR71 780 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 TM7SF3Q9NS93 570 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 OBP2AQ9NY56 170 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 KIAA1024Q9UPX6 916 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 HES2Q9Y543 173 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 IPPQ9Y573 584 aa12.42□□□□□ -0.42
ATXN3-201ENST00000340660 ANO9A1A5B4 782 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 CYTH3O43739 400 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 CILPO75339 1184 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
ATXN3-201ENST00000340660 ARAFP10398 606 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 HNF1BP35680 557 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 TXLNAP40222 546 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 ROR1Q01973 937 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 LINC00303Q3SY05 128 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 ZMYM1Q5SVZ6 1142 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 IQCEQ6IPM2 695 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 NFXL1Q6ZNB6 911 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 SRRM1Q8IYB3 904 aaKnown RBP12.41□□□□□ -0.42
ATXN3-201ENST00000340660 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 CUL5Q93034 780 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 EBF3Q9H4W6 596 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 RIOX1Q9H6W3 641 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 GKN1Q9NS71 199 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 GMIPQ9P107 970 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 TBX20Q9UMR3 447 aa12.41□□□□□ -0.42
ATXN3-201ENST00000340660 NEDD4P46934 1319 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 PNMA6FA0A0J9YX94 578 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 LOC100996750A0A140TA64 210 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 K7ENP7 123 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 ABLIM3O94929 683 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 MCM2P49736 904 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 PCBP4P57723 403 aaKnown RBP12.4□□□□□ -0.42
ATXN3-201ENST00000340660 HAND2P61296 217 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 MIS18BP1Q6P0N0 1132 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 INO80CQ6PI98 192 aaPredicted RBP12.4□□□□□ -0.42
ATXN3-201ENST00000340660 TBC1D10CQ8IV04 446 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 TCEAL8Q8IYN2 117 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 CCDC33Q8N5R6 958 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 ENAHQ8N8S7 591 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms