RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 TMEM270Q6UE05 265 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 C4orf50Q6ZRC1 276 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 TMEM174Q8WUU8 243 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 ACSF2Q96CM8 615 aaPredicted RBP16.41■□□□□ 0.22
UBAP1-201ENST00000297661 FBXL18Q96ME1 805 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 LBHD1Q9BQE6 289 aaPredicted RBP16.41■□□□□ 0.22
UBAP1-201ENST00000297661 TIPINQ9BVW5 301 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 ADAM33Q9BZ11 813 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 ANKFY1Q9P2R3 1169 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 SSC5DA1L4H1 1573 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 VWA5AO00534 786 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 PMM2O15305 246 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 TJP3O95049 919 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 TTC4O95801 387 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 IVDP26440 423 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 GSTT1P30711 240 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 SFNP31947 248 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 LIG4P49917 911 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 OCRLQ01968 901 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 PRKCEQ02156 737 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 RCN1Q15293 331 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 C12orf50Q8NA57 414 aaPredicted RBP16.4■□□□□ 0.22
UBAP1-201ENST00000297661 TMC2Q8TDI7 906 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 DDX27Q96GQ7 796 aaKnown RBP16.4■□□□□ 0.22
UBAP1-201ENST00000297661 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 GBP5Q96PP8 586 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 DCLK3Q9C098 648 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 HAPLN2Q9GZV7 340 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 SLCO1B3Q9NPD5 702 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 DMAP1Q9NPF5 467 aaPredicted RBP16.4■□□□□ 0.22
UBAP1-201ENST00000297661 METTL5Q9NRN9 209 aaKnown RBP16.4■□□□□ 0.22
UBAP1-201ENST00000297661 TRAFD1O14545 582 aaPredicted RBP16.4■□□□□ 0.22
UBAP1-201ENST00000297661 THAP12O43422 761 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 ZBED4O75132 1171 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 STBD1O95210 358 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 PTPN4P29074 926 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 SNRNP48Q6IEG0 339 aaKnown RBP16.4■□□□□ 0.22
UBAP1-201ENST00000297661 SMC1BQ8NDV3 1235 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 FNBP1Q96RU3 617 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 APOBEC3GQ9HC16 384 aaKnown RBP16.4■□□□□ 0.22
UBAP1-201ENST00000297661 ANAPC5Q9UJX4 755 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 NAALADL1Q9UQQ1 740 aa16.4■□□□□ 0.22
UBAP1-201ENST00000297661 MAGEA13PA6NCF6 341 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 KRT10P13645 584 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 ATF2P15336 505 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 CYP4F22Q6NT55 531 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 CAPN12Q6ZSI9 719 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 VSIG10LQ86VR7 867 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 LPAR1Q92633 364 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 SNF8Q96H20 258 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 WRNIP1Q96S55 665 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 OCEL1Q9H607 264 aa16.39■□□□□ 0.22
UBAP1-201ENST00000297661 CREB3O43889 395 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 RHBDF2Q6PJF5 856 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 DSTYKQ6XUX3 929 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 GLIS1Q8NBF1 620 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 GATA6Q92908 595 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 NDNQ99608 321 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 PCDHB4Q9Y5E5 795 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 FAM47DPA6NHR8 397 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 VNN1O95497 513 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 ZSCAN5DPP0CG00 497 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 KCNA2P16389 499 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 SNRPFP62306 86 aaKnown RBP16.39■□□□□ 0.21
UBAP1-201ENST00000297661 TAF1BQ53T94 588 aaPredicted RBP16.39■□□□□ 0.21
UBAP1-201ENST00000297661 WDR44Q5JSH3 913 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBAP1-201ENST00000297661 SDCCAG8Q86SQ7 713 aaPredicted RBP16.39■□□□□ 0.21
UBAP1-201ENST00000297661 PTPRN2Q92932 1015 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 MRRFQ96E11 262 aaKnown RBP16.39■□□□□ 0.21
UBAP1-201ENST00000297661 MIPEPQ99797 713 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 FAM192AQ9GZU8 254 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 TLE6Q9H808 572 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 CYP26B1Q9NR63 512 aa16.39■□□□□ 0.21
UBAP1-201ENST00000297661 KRT36O76013 467 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 CCND2P30279 289 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 PSMC4P43686 418 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 ACTR2P61160 394 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 GCNT1Q02742 428 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 FSTL1Q12841 308 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 TMEM63BQ5T3F8 832 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 FKBP1CQ5VVH2 108 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 LRRC74BQ6ZQY2 392 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 SESTD1Q86VW0 696 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 HAUS1Q96CS2 278 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 NTPCRQ9BSD7 190 aaKnown RBP16.38■□□□□ 0.21
UBAP1-201ENST00000297661 PLVAPQ9BX97 442 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 JPH1Q9HDC5 661 aaPredicted RBP16.38■□□□□ 0.21
UBAP1-201ENST00000297661 NINJ2Q9NZG7 142 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 WHRNQ9P202 907 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 LGALS13Q9UHV8 139 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 PCDHB2Q9Y5E7 798 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 LRRIQ4A6NIV6 560 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 RASA4BC9J798 803 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 CAPN9O14815 690 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 MAGEB2O15479 319 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 RASA4O43374 803 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 CDH16O75309 829 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 EDN1P05305 212 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms