RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ABCB5Q2M3G0 1257 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 GALNT18Q6P9A2 607 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 CCNI2Q6ZMN8 369 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 EPM2AIP1Q7L775 607 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 SIAH1Q8IUQ4 282 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 ZFPM1Q8IX07 1006 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 DHX37Q8IY37 1157 aaKnown RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 PDZD8Q8NEN9 1154 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 COG1Q8WTW3 980 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 CHAC2Q8WUX2 184 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 LENG9Q96B70 501 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 OSBPL9Q96SU4 736 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 LSM14BQ9BX40 385 aaKnown RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 METTL14Q9HCE5 456 aaKnown RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 FBXL5Q9UKA1 691 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 TFR2Q9UP52 801 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 MAPRE3Q9UPY8 281 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 DUSP10Q9Y6W6 482 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 ADAMTSL1Q8N6G6 1762 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 CES2O00748 559 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 OPA1O60313 960 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 RPS6KA5O75582 802 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 MYCLP1P12525 358 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 CPEP16870 476 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 RPL13P26373 211 aaKnown RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 MASP1P48740 699 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 ADAM9Q13443 819 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 GIT2Q14161 759 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 CBX2Q14781 532 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 SLC18A3Q16572 532 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 PTPROQ16827 1216 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 CATSPER3Q86XQ3 398 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 COL23A1Q86Y22 540 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 TP53INP2Q8IXH6 220 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 SPATA4Q8NEY3 305 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 GANQ9H2C0 597 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 ZCCHC17Q9NP64 241 aaKnown RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 OLFML3Q9NRN5 406 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 HERC5Q9UII4 1024 aaKnown RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 DAAM1Q9Y4D1 1078 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 BRWD3Q6RI45 1802 aa8.52□□□□□ -1.04
CXCR4-201ENST00000241393 ZNF646O15015 1829 aaPredicted RBP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 UBE4BO95155 1302 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 GTPBP10A4D1E9 387 aaKnown RBP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 GRID2IPA4D2P6 1211 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 LRRIQ3A6PVS8 624 aaPredicted RBP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 EIF3DO15371 548 aaKnown RBP eCLIP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 ECE2O60344 883 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 TLR2O60603 784 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 MOCS3O95396 460 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 EYA4O95677 639 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 MMP10P09238 476 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 NR2F2P24468 414 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 EPS15P42566 896 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 POLR2FP61218 127 aaKnown RBP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 CYP4F3Q08477 520 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 LSAMPQ13449 338 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 PLCL1Q15111 1095 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 NAB2Q15742 525 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 ASIC2Q16515 512 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 C21orf62-AS1Q17RA5 79 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 PRR16Q569H4 304 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 TDRD12Q587J7 1177 aaKnown RBP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 FAM47CQ5HY64 1035 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 LBX2Q6XYB7 198 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 DDX53Q86TM3 631 aaKnown RBP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 GOLGA5Q8TBA6 731 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 SLC7A14Q8TBB6 771 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 SMCR8Q8TEV9 937 aaPredicted RBP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 LINC01599Q8WXQ3 324 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 CAPZA3Q96KX2 299 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 DBNDD1Q9H9R9 158 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 MLXIPQ9HAP2 919 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 TUFT1Q9NNX1 390 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 TYW1Q9NV66 732 aaKnown RBP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 ARMCX3Q9UH62 379 aaPredicted RBP8.52□□□□□ -1.05
CXCR4-201ENST00000241393 HPCAL4Q9UM19 191 aa8.52□□□□□ -1.05
CXCR4-201ENST00000241393 FADS2P1A8MWK0 482 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 ZNF185O15231 689 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 PLA2G6O60733 806 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 GFPT2O94808 682 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 AFPP02771 609 aaKnown RBP8.51□□□□□ -1.05
CXCR4-201ENST00000241393 ZGLP1P0C6A0 271 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 CNGA1P29973 690 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 PRKCIP41743 596 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 RTP1P59025 263 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 GFPT1Q06210 699 aaPredicted RBP8.51□□□□□ -1.05
CXCR4-201ENST00000241393 CFAP221Q4G0U5 840 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 CCDC181Q5TID7 509 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 KLHDC7AQ5VTJ3 777 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 DENND5AQ6IQ26 1287 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 EMBQ6PCB8 327 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 SPRED2Q7Z698 418 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 FMNL3Q8IVF7 1028 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 NELFCDQ8IXH7 590 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 LILRA2Q8N149 483 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 SUPT20HQ8NEM7 779 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 AENQ8WTP8 325 aaKnown RBP8.51□□□□□ -1.05
CXCR4-201ENST00000241393 CRACR2AQ9BSW2 395 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 TLR10Q9BXR5 811 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms