RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Robo1O89026 1612 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Uhrf1bp1lA2RSJ4 1457 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 4921501E09RikA0A0R4J054 908 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mpig6bD7PDD4 242 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rdh7O88451 316 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Idh1O88844 414 aaKnown RBP9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 PrkceP16054 737 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 ZfxP17012 799 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ptpn22P29352 802 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Man1a2P39098 641 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 MatkP41242 505 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rplp1P47955 114 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Adcyap1r1P70205 496 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Q3TTL0 348 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gas7Q60780 421 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Stard3Q61542 446 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Grik5Q61626 979 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ltbp3Q61810 1268 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 MogQ61885 246 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 RetsatQ64FW2 609 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Olfr1046Q7TR79 316 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ubap1Q8BH48 502 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ehd2Q8BH64 543 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Fbxo28Q8BIG4 368 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Miga2Q8BK03 593 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Prkaa2Q8BRK8 552 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Slc13a4Q8BZ82 625 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Galnt6Q8C7U7 622 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 FbrsQ8R089 466 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Exoc1Q8R3S6 894 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Col26a1Q91VF6 440 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Atl3Q91YH5 541 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 AslQ91YI0 464 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Plpp6Q9D4F2 292 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Abcb10Q9JI39 715 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Plod1Q9R0E2 728 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cdc7Q9Z0H0 564 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ppp2r3dQ9Z176 491 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Eya4Q9Z191 616 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Slit1Q80TR4 1531 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 GakQ99KY4 1305 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gm6502L7N456 481 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Zfy1P10925 782 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 SmoP56726 793 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Q32P12 615 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gm136Q3V037 328 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Abi3bpQ59IW6 1179 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mettl7a2Q5I0W6 244 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rhpn1Q61085 643 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Kcna5Q61762 602 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Apex2Q68G58 516 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 CyldQ80TQ2 952 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rps6ka5Q8C050 863 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mettl7a1Q8C6B0 244 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ccdc150Q8CDI7 1110 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pnpt1Q8K1R3 783 aaKnown RBP9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ntmt1Q8R2U4 223 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Hbp1Q8R316 516 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ccdc12Q8R344 166 aaKnown RBP9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Idh3bQ91VA7 384 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ddx1Q91VR5 740 aaKnown RBP9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 GzmnQ920S1 248 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Dnajb11Q99KV1 358 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Tubb4aQ9D6F9 444 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Aldh6a1Q9EQ20 535 aaKnown RBP9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rcan3Q9JKK0 239 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Trpc4apQ9JLV2 797 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 PigqQ9QYT7 581 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 NagkQ9QZ08 343 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 LipaQ9Z0M5 397 aa9.57□□□□□ -0.88
Upf3b-201ENSMUST00000076265 1700031M16RikA0A087WSH0 82 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ccdc152E9PX14 254 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Serpinb9O08797 374 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Il13ra1O09030 424 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gucy1b3O54865 620 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Chrna1P04756 457 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Xrcc6P23475 608 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Aldh1a1P24549 501 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Alox5P48999 674 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Lig3P97386 1015 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pld2P97813 933 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Armc2Q3URY6 854 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Q3USZ8 430 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cdv3Q4VAA2 281 aaKnown RBP9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Lcp2Q60787 533 aaKnown RBP9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cntn2Q61330 1040 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 EfsQ64355 560 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gstt1Q64471 240 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 EnkurQ6SP97 255 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Klhl17Q6TDP3 640 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ssxb5Q6XAS2 159 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 PolnQ7TQ07 864 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 R3hdm2Q80TM6 1044 aaKnown RBP9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 AbraQ8BUZ1 375 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 TbcelQ8C5W3 424 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Calhm6Q8C9E8 313 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 LiphQ8CIV3 451 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Coq9Q8K1Z0 313 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Lsm1Q8VC85 133 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pglyrp2Q8VCS0 530 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms