RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Prmt7Q922X9 692 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ino80bQ99PT3 375 aaKnown RBP10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Arhgef37A1IGU4 676 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Klra1P20937 262 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Lilrb3P97484 841 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tmc8Q7TN58 722 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Catsper3Q80W99 395 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Phka2Q8BWJ3 1235 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Lgi2Q8K4Z0 550 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 ChiaQ91XA9 473 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Rnf31Q924T7 1066 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Haus8Q99L00 373 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Drg2Q9QXB9 364 aaKnown RBP10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Krt16Q9Z2K1 469 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Serpinb3cA2RSF9 386 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Nfatc2ipO09130 412 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 RarbP22605 482 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 PdgfraP26618 1089 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ptpn12P35831 775 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Mxi1P50540 228 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Myl2P51667 166 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ddr1Q03146 911 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Neurl1bQ0MW30 546 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Rhox12Q4TU81 186 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Trim36Q80WG7 729 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Trim47Q8C0E3 641 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Trpv6Q91WD2 767 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Batf3Q9D275 118 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 PudpQ9D5U5 234 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 1700018B08RikQ9DA83 213 aa10.36□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Rad51ap2G3UW63 976 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gm7942L7N277 499 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 CblP22682 913 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Pbx1P41778 430 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Heatr9Q5QNV8 569 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Satb1Q60611 764 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Map2k2Q63932 401 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Sarm1Q6PDS3 724 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gtf3c4Q8BMQ2 817 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Galnt5Q8C102 930 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ccdc90bQ8C3X2 256 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gnl3Q8CI11 538 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Cyp39a1Q9JKJ9 470 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Myo5bP21271 1818 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Zscan4-ps3A0A1B0GRH6 506 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Zscan4-ps2A0A1C7CYU6 506 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Scgb2b7D3YYY1 112 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Abce1P61222 599 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Casp4P70343 373 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Fgfr4Q03142 799 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Itih3Q61704 889 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Zrsr1Q64707 428 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ush1gQ80T11 461 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 NrcamQ810U4 1256 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 TxlngQ8BHN1 524 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 EmsyQ8BMB0 1264 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Stx19Q8R1Q0 292 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 MyocdQ8VIM5 935 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tnip2Q99JG7 430 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Rrp15Q9CYX7 281 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Lrrc46Q9DAP0 323 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Abcg8Q9DBM0 673 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Cpsf3Q9QXK7 684 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Col3a1P08121 1464 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Arrdc4A0A0B4J1F4 415 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 LxnP70202 222 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 P2rx5Q3UYI1 455 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Klra7Q60654 280 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Capn11Q6J756 714 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ntrk3Q6VNS1 825 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ssxb5Q6XAS2 159 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Trim62Q80V85 475 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Olfml3Q8BK62 406 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Pak5Q8C015 719 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Sept11Q8C1B7 431 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tmem145Q8C4U2 746 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Pcdhgb4Q91XX6 912 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Atp6v1b1Q91YH6 513 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Frmd4bQ920B0 1035 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ppp1r3gQ9CW07 347 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Clca1Q9D7Z6 913 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Mxra8Q9DBV4 442 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Atp6v1g2Q9WTT4 118 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Hao1Q9WU19 370 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Slfn14V9GXG1 899 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ttc30a2A2AKQ8 664 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 GclmO09172 274 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Shoc2O88520 582 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 MycP01108 439 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Pon1P52430 355 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Q14AM7 275 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Acsbg2Q2XU92 667 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Axdnd1Q3UZ57 424 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tdrd5Q5VCS6 1040 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Creb3Q61817 404 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tm4sf1Q64302 202 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Trim14Q8BVW3 440 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 NkrfQ8BY02 690 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Alas1Q8VC19 642 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tjap1Q9DCD5 539 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms