RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W HPM1P40481 377 aa1.44□□□□□ -2.18
SRP1YNL189W HHT1P61830 136 aa1.44□□□□□ -2.18
SRP1YNL189W CSN9Q03981 162 aa1.44□□□□□ -2.18
SRP1YNL189W GAL83Q04739 417 aa1.44□□□□□ -2.18
SRP1YNL189W YMR320WQ04897 101 aa1.44□□□□□ -2.18
SRP1YNL189W ATP20Q12233 115 aa1.44□□□□□ -2.18
SRP1YNL189W YIR021W-AQ3E739 70 aa1.44□□□□□ -2.18
SRP1YNL189W YLR412C-AQ3E742 68 aa1.44□□□□□ -2.18
SRP1YNL189W MSB2P32334 1306 aa1.43□□□□□ -2.18
SRP1YNL189W MRPL24P36525 258 aaPredicted RBP1.43□□□□□ -2.18
SRP1YNL189W GLR1P41921 483 aaKnown RBP1.43□□□□□ -2.18
SRP1YNL189W RBL2P48606 106 aaKnown RBP1.43□□□□□ -2.18
SRP1YNL189W LSM3P57743 89 aaKnown RBP1.43□□□□□ -2.18
SRP1YNL189W ARL3Q02804 198 aa1.43□□□□□ -2.18
SRP1YNL189W DIG2Q03373 323 aaKnown RBP1.43□□□□□ -2.18
SRP1YNL189W FRQ1Q06389 190 aa1.43□□□□□ -2.18
SRP1YNL189W WIP1Q2V2P8 89 aa1.43□□□□□ -2.18
SRP1YNL189W YPR014CQ6B0W2 109 aa1.43□□□□□ -2.18
SRP1YNL189W AIM2P39721 246 aa1.42□□□□□ -2.18
SRP1YNL189W FIP1P45976 327 aa1.42□□□□□ -2.18
SRP1YNL189W TIM13P53299 105 aa1.42□□□□□ -2.18
SRP1YNL189W TIM8P57744 87 aa1.42□□□□□ -2.18
SRP1YNL189W VPS71Q03433 280 aa1.42□□□□□ -2.18
SRP1YNL189W FMN1Q03778 218 aa1.42□□□□□ -2.18
SRP1YNL189W SDH7Q04401 133 aa1.42□□□□□ -2.18
SRP1YNL189W RNH202Q05635 350 aa1.42□□□□□ -2.18
SRP1YNL189W PRP11Q07350 266 aaPredicted RBP1.42□□□□□ -2.18
SRP1YNL189W IRC23Q08416 157 aa1.42□□□□□ -2.18
SRP1YNL189W RPL30P14120 105 aaKnown RBP1.41□□□□□ -2.18
SRP1YNL189W RPS1BP23248 255 aaKnown RBP1.41□□□□□ -2.18
SRP1YNL189W BUD23P25627 275 aaPredicted RBP1.41□□□□□ -2.18
SRP1YNL189W SPC25P40014 221 aa1.41□□□□□ -2.18
SRP1YNL189W APQ12P40532 138 aa1.41□□□□□ -2.18
SRP1YNL189W GLC8P41818 229 aa1.41□□□□□ -2.18
SRP1YNL189W HHO1P53551 258 aa1.41□□□□□ -2.18
SRP1YNL189W MZM1Q03429 123 aaPredicted RBP1.41□□□□□ -2.18
SRP1YNL189W YMR253CQ04835 414 aa1.41□□□□□ -2.18
SRP1YNL189W FCY1Q12178 158 aa1.41□□□□□ -2.18
SRP1YNL189W YCR101CP25607 182 aa1.4□□□□□ -2.18
SRP1YNL189W SUI1P32911 108 aaKnown RBP1.4□□□□□ -2.18
SRP1YNL189W PAM17P36147 197 aa1.4□□□□□ -2.18
SRP1YNL189W RPS20P38701 121 aaKnown RBP1.4□□□□□ -2.18
SRP1YNL189W RGI1P40043 161 aaPredicted RBP1.4□□□□□ -2.18
SRP1YNL189W CUP9P41817 306 aa1.4□□□□□ -2.18
SRP1YNL189W LDB18Q07887 179 aa1.4□□□□□ -2.18
SRP1YNL189W YNL146C-AQ3E7Z1 64 aa1.4□□□□□ -2.18
SRP1YNL189W SSN2P38931 1420 aa1.4□□□□□ -2.18
SRP1YNL189W UBR1P19812 1950 aa1.4□□□□□ -2.18
SRP1YNL189W STP22P25604 385 aa1.4□□□□□ -2.19
SRP1YNL189W SPT14P32363 452 aa1.4□□□□□ -2.19
SRP1YNL189W YHL018WP38744 120 aaPredicted RBP1.4□□□□□ -2.19
SRP1YNL189W VMA7P39111 118 aa1.4□□□□□ -2.19
SRP1YNL189W XPT1P47165 209 aa1.4□□□□□ -2.19
SRP1YNL189W YNL033WP53964 284 aa1.4□□□□□ -2.19
SRP1YNL189W YDR366CP87287 132 aa1.4□□□□□ -2.19
SRP1YNL189W HRD1Q08109 551 aa1.4□□□□□ -2.19
SRP1YNL189W YOR381W-AQ3E804 55 aa1.4□□□□□ -2.19
SRP1YNL189W YOR304C-AO14468 76 aa1.39□□□□□ -2.19
SRP1YNL189W YRA2P36036 203 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SRP1YNL189W RRT1P38192 103 aa1.39□□□□□ -2.19
SRP1YNL189W DLS1P40366 167 aa1.39□□□□□ -2.19
SRP1YNL189W YJL218WP40892 196 aaKnown RBP1.39□□□□□ -2.19
SRP1YNL189W YGL193CP53097 103 aa1.39□□□□□ -2.19
SRP1YNL189W APS2Q00381 147 aa1.39□□□□□ -2.19
SRP1YNL189W COF1Q03048 143 aaKnown RBP1.39□□□□□ -2.19
SRP1YNL189W AIM36Q03798 255 aa1.39□□□□□ -2.19
SRP1YNL189W YPR174CQ06616 221 aaPredicted RBP1.39□□□□□ -2.19
SRP1YNL189W YPL225WQ08971 146 aaKnown RBP1.39□□□□□ -2.19
SRP1YNL189W ATP14Q12349 124 aa1.39□□□□□ -2.19
SRP1YNL189W ATP5P09457 212 aa1.38□□□□□ -2.19
SRP1YNL189W AQY2P0CD90 149 aa1.38□□□□□ -2.19
SRP1YNL189W NMT1P14743 455 aa1.38□□□□□ -2.19
SRP1YNL189W NSP1P14907 823 aaKnown RBP1.38□□□□□ -2.19
SRP1YNL189W PHO13P19881 312 aa1.38□□□□□ -2.19
SRP1YNL189W UGX2P32772 223 aa1.38□□□□□ -2.19
SRP1YNL189W NSA2P40078 261 aaKnown RBP1.38□□□□□ -2.19
SRP1YNL189W YER181CP40097 107 aa1.38□□□□□ -2.19
SRP1YNL189W SBH1P52870 82 aa1.38□□□□□ -2.19
SRP1YNL189W CWC27Q02770 301 aa1.38□□□□□ -2.19
SRP1YNL189W YDR102CQ03864 110 aa1.38□□□□□ -2.19
SRP1YNL189W YPR114WQ06107 315 aa1.38□□□□□ -2.19
SRP1YNL189W NKP2Q06162 153 aa1.38□□□□□ -2.19
SRP1YNL189W FIT2Q08906 153 aa1.38□□□□□ -2.19
SRP1YNL189W SPC3Q12133 184 aa1.38□□□□□ -2.19
SRP1YNL189W YOR214CQ12282 236 aa1.38□□□□□ -2.19
SRP1YNL189W YNL277W-AQ3E7Z0 62 aa1.38□□□□□ -2.19
SRP1YNL189W HSL1P34244 1518 aa1.38□□□□□ -2.19
SRP1YNL189W RIF1P29539 1916 aa1.38□□□□□ -2.19
SRP1YNL189W ACC1Q00955 2233 aaKnown RBP1.38□□□□□ -2.19
SRP1YNL189W MDM35O60200 86 aa1.37□□□□□ -2.19
SRP1YNL189W SRP21P32342 167 aa1.37□□□□□ -2.19
SRP1YNL189W YEL028WP39989 153 aa1.37□□□□□ -2.19
SRP1YNL189W RIO2P40160 425 aaKnown RBP1.37□□□□□ -2.19
SRP1YNL189W GPI2P46961 280 aa1.37□□□□□ -2.19
SRP1YNL189W YGR039WP53225 103 aa1.37□□□□□ -2.19
SRP1YNL189W YMR295CQ03559 197 aa1.37□□□□□ -2.19
SRP1YNL189W RUB1Q03919 77 aa1.37□□□□□ -2.19
SRP1YNL189W CNL1Q06333 122 aa1.37□□□□□ -2.19
SRP1YNL189W YHR007C-AQ07074 71 aa1.37□□□□□ -2.19
SRP1YNL189W YOR015WQ12169 119 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms