RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C DGA1Q08650 418 aa4.29□□□□□ -1.72
SEC39YLR440C YPL162CQ12042 273 aa4.29□□□□□ -1.72
SEC39YLR440C AQY1P0CD91 305 aa4.28□□□□□ -1.72
SEC39YLR440C ALK2P32789 676 aaPredicted RBP4.28□□□□□ -1.72
SEC39YLR440C ARN2P38724 620 aa4.28□□□□□ -1.72
SEC39YLR440C YHR140WP38842 239 aa4.28□□□□□ -1.72
SEC39YLR440C YIL165CP40446 119 aa4.28□□□□□ -1.72
SEC39YLR440C GPI2P46961 280 aa4.28□□□□□ -1.72
SEC39YLR440C NUP100Q02629 959 aa4.28□□□□□ -1.72
SEC39YLR440C RRG7Q08774 242 aaPredicted RBP4.28□□□□□ -1.72
SEC39YLR440C YPR015CQ12531 247 aa4.28□□□□□ -1.72
SEC39YLR440C FKS1P38631 1876 aaKnown RBP4.28□□□□□ -1.72
SEC39YLR440C MDM10P18409 493 aa4.28□□□□□ -1.72
SEC39YLR440C SPO13P23624 291 aa4.28□□□□□ -1.72
SEC39YLR440C CSE2P33308 149 aa4.28□□□□□ -1.72
SEC39YLR440C ZRT3P34240 503 aa4.28□□□□□ -1.72
SEC39YLR440C RPL14AP36105 138 aaKnown RBP4.28□□□□□ -1.72
SEC39YLR440C CYB5P40312 120 aa4.28□□□□□ -1.72
SEC39YLR440C YIA6P40556 373 aa4.28□□□□□ -1.72
SEC39YLR440C OST1P41543 476 aaKnown RBP4.28□□□□□ -1.72
SEC39YLR440C TOS8P53147 276 aa4.28□□□□□ -1.72
SEC39YLR440C VHT1P53241 593 aa4.28□□□□□ -1.72
SEC39YLR440C NCE103P53615 221 aa4.28□□□□□ -1.72
SEC39YLR440C PRS5Q12265 496 aaKnown RBP4.28□□□□□ -1.72
SEC39YLR440C YGL010WP25338 174 aa4.27□□□□□ -1.73
SEC39YLR440C MRP17P28778 131 aa4.27□□□□□ -1.73
SEC39YLR440C MRP21P38175 177 aa4.27□□□□□ -1.73
SEC39YLR440C ATX1P38636 73 aa4.27□□□□□ -1.73
SEC39YLR440C YHR138CP38841 114 aaPredicted RBP4.27□□□□□ -1.73
SEC39YLR440C YAR029WP39549 74 aa4.27□□□□□ -1.73
SEC39YLR440C CUP9P41817 306 aa4.27□□□□□ -1.73
SEC39YLR440C MST27P53176 234 aa4.27□□□□□ -1.73
SEC39YLR440C YDL009CQ12210 107 aa4.27□□□□□ -1.73
SEC39YLR440C TRP1P00912 224 aa4.27□□□□□ -1.73
SEC39YLR440C TFS1P14306 219 aa4.27□□□□□ -1.73
SEC39YLR440C YBR063CP38083 404 aa4.27□□□□□ -1.73
SEC39YLR440C PAU15P40585 124 aa4.27□□□□□ -1.73
SEC39YLR440C CAX4P53223 239 aa4.27□□□□□ -1.73
SEC39YLR440C LSM7P53905 115 aaKnown RBP4.27□□□□□ -1.73
SEC39YLR440C RAF1Q06891 181 aa4.27□□□□□ -1.73
SEC39YLR440C MPD1Q12404 318 aaKnown RBP4.27□□□□□ -1.73
SEC39YLR440C YPR064WQ12492 139 aa4.27□□□□□ -1.73
SEC39YLR440C POR1P04840 283 aaKnown RBP4.26□□□□□ -1.73
SEC39YLR440C URA10P30402 227 aa4.26□□□□□ -1.73
SEC39YLR440C MBB1P39534 108 aa4.26□□□□□ -1.73
SEC39YLR440C RIM8P53179 542 aa4.26□□□□□ -1.73
SEC39YLR440C PET191Q02772 108 aa4.26□□□□□ -1.73
SEC39YLR440C AVO2Q04749 426 aa4.26□□□□□ -1.73
SEC39YLR440C RFM1Q12192 310 aa4.26□□□□□ -1.73
SEC39YLR440C MHF1Q3E835 90 aa4.26□□□□□ -1.73
SEC39YLR440C RPL22AP05749 121 aaKnown RBP4.25□□□□□ -1.73
SEC39YLR440C RPS13P05756 151 aaKnown RBP4.25□□□□□ -1.73
SEC39YLR440C ARF1P11076 181 aaKnown RBP4.25□□□□□ -1.73
SEC39YLR440C CDC43P18898 376 aa4.25□□□□□ -1.73
SEC39YLR440C YMC2P38087 329 aa4.25□□□□□ -1.73
SEC39YLR440C BUD25P85052 153 aa4.25□□□□□ -1.73
SEC39YLR440C YPL119C-AQ3E751 87 aa4.25□□□□□ -1.73
SEC39YLR440C PEX2P32800 271 aa4.25□□□□□ -1.73
SEC39YLR440C SDS24P38314 527 aa4.25□□□□□ -1.73
SEC39YLR440C PHO89P38361 574 aa4.25□□□□□ -1.73
SEC39YLR440C YNL198CP40166 100 aa4.25□□□□□ -1.73
SEC39YLR440C YJL213WP40896 331 aa4.25□□□□□ -1.73
SEC39YLR440C EMC4P53073 190 aa4.25□□□□□ -1.73
SEC39YLR440C YPL062WQ02781 134 aa4.25□□□□□ -1.73
SEC39YLR440C NMA1Q06178 401 aaKnown RBP4.25□□□□□ -1.73
SEC39YLR440C YDR215CQ12240 137 aa4.25□□□□□ -1.73
SEC39YLR440C YDL180WQ12301 547 aa4.25□□□□□ -1.73
SEC39YLR440C SWM1Q12379 170 aa4.25□□□□□ -1.73
SEC39YLR440C CYC1P00044 109 aaPredicted RBP4.24□□□□□ -1.73
SEC39YLR440C YCR085WP25650 117 aa4.24□□□□□ -1.73
SEC39YLR440C MIX23P38162 196 aa4.24□□□□□ -1.73
SEC39YLR440C YBL081WP38180 368 aaKnown RBP4.24□□□□□ -1.73
SEC39YLR440C YER134CP40081 178 aa4.24□□□□□ -1.73
SEC39YLR440C FIP1P45976 327 aa4.24□□□□□ -1.73
SEC39YLR440C TOS2P50078 622 aa4.24□□□□□ -1.73
SEC39YLR440C ALG9P53868 555 aaKnown RBP4.24□□□□□ -1.73
SEC39YLR440C RNH201P53942 307 aa4.24□□□□□ -1.73
SEC39YLR440C JID1Q12350 301 aa4.24□□□□□ -1.73
SEC39YLR440C KSH1Q8TGJ3 72 aa4.24□□□□□ -1.73
SEC39YLR440C TOR2P32600 2474 aaKnown RBP4.24□□□□□ -1.73
SEC39YLR440C YAR066WP0CX18 203 aa4.24□□□□□ -1.73
SEC39YLR440C YHR214WP0CX19 203 aa4.24□□□□□ -1.73
SEC39YLR440C YKL097CP34245 136 aa4.24□□□□□ -1.73
SEC39YLR440C PAM17P36147 197 aa4.24□□□□□ -1.73
SEC39YLR440C IRC22P40006 225 aa4.24□□□□□ -1.73
SEC39YLR440C SPR6Q01684 191 aa4.24□□□□□ -1.73
SEC39YLR440C ELP4Q02884 456 aaKnown RBP4.24□□□□□ -1.73
SEC39YLR440C YDR344CQ05510 147 aa4.24□□□□□ -1.73
SEC39YLR440C ANT1Q06497 328 aa4.24□□□□□ -1.73
SEC39YLR440C HEM2P05373 342 aa4.23□□□□□ -1.73
SEC39YLR440C CDC5P32562 705 aa4.23□□□□□ -1.73
SEC39YLR440C APS1P35181 156 aa4.23□□□□□ -1.73
SEC39YLR440C GCV3P39726 170 aaPredicted RBP4.23□□□□□ -1.73
SEC39YLR440C SPO73P40031 143 aa4.23□□□□□ -1.73
SEC39YLR440C MCH4Q08268 501 aa4.23□□□□□ -1.73
SEC39YLR440C TIM18Q08749 192 aa4.23□□□□□ -1.73
SEC39YLR440C YBR255C-AQ3E776 120 aa4.23□□□□□ -1.73
SEC39YLR440C ENV10Q99382 181 aa4.23□□□□□ -1.73
SEC39YLR440C PAU19P0CE85 124 aa4.22□□□□□ -1.73
SEC39YLR440C PAU21P0CE86 164 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms