RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeastyeast

Gene VTA1, Length 993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTA1YLR181C MDH2P22133 377 aa3.06□□□□□ -1.92
VTA1YLR181C UTP30P36144 274 aaKnown RBP3.06□□□□□ -1.92
VTA1YLR181C VMA22P38784 181 aa3.06□□□□□ -1.92
VTA1YLR181C DLS1P40366 167 aa3.06□□□□□ -1.92
VTA1YLR181C YGL159WP53110 370 aa3.06□□□□□ -1.92
VTA1YLR181C YGR042WP53227 271 aa3.06□□□□□ -1.92
VTA1YLR181C KEI1Q06346 221 aa3.06□□□□□ -1.92
VTA1YLR181C HEM25Q07534 307 aa3.06□□□□□ -1.92
VTA1YLR181C YHR214C-EQ8TGK0 99 aa3.06□□□□□ -1.92
VTA1YLR181C FLO9P39712 1322 aa3.05□□□□□ -1.92
VTA1YLR181C SNC2P33328 115 aa3.05□□□□□ -1.92
VTA1YLR181C YMR144WP40214 342 aaKnown RBP3.05□□□□□ -1.92
VTA1YLR181C ERJ5P43613 295 aaPredicted RBP3.05□□□□□ -1.92
VTA1YLR181C GIM3P53900 129 aa3.05□□□□□ -1.92
VTA1YLR181C DIG2Q03373 323 aaKnown RBP3.05□□□□□ -1.92
VTA1YLR181C YLR031WQ07978 186 aa3.05□□□□□ -1.92
VTA1YLR181C Q0144Q9ZZW2 109 aa3.05□□□□□ -1.92
VTA1YLR181C STF2P16965 84 aa3.04□□□□□ -1.92
VTA1YLR181C YBL010CP32788 280 aa3.04□□□□□ -1.92
VTA1YLR181C YER085CP40058 173 aa3.04□□□□□ -1.92
VTA1YLR181C YER137CP40083 148 aaKnown RBP3.04□□□□□ -1.92
VTA1YLR181C ARC15P40518 154 aaRIP-Chip data3.04□□□□□ -1.92not detected
VTA1YLR181C OTU1P43558 301 aa3.04□□□□□ -1.92
VTA1YLR181C ADO1P47143 340 aaKnown RBP3.04□□□□□ -1.92
VTA1YLR181C BXI1P48558 297 aa3.04□□□□□ -1.92
VTA1YLR181C NRK1P53915 240 aa3.04□□□□□ -1.92
VTA1YLR181C BUD25P85052 153 aa3.04□□□□□ -1.92
VTA1YLR181C HNT1Q04344 158 aaKnown RBP3.04□□□□□ -1.92
VTA1YLR181C COA4Q05809 96 aa3.04□□□□□ -1.92
VTA1YLR181C GRE1Q08969 168 aa3.04□□□□□ -1.92
VTA1YLR181C YDL180WQ12301 547 aa3.04□□□□□ -1.92
VTA1YLR181C RDI1Q12434 202 aa3.04□□□□□ -1.92
VTA1YLR181C IPP1P00817 287 aaKnown RBP3.03□□□□□ -1.92
VTA1YLR181C CDC36P06100 191 aaPredicted RBP3.03□□□□□ -1.92
VTA1YLR181C NHP6BP11633 99 aaKnown RBP3.03□□□□□ -1.92
VTA1YLR181C URA6P15700 204 aa3.03□□□□□ -1.92
VTA1YLR181C MRP17P28778 131 aa3.03□□□□□ -1.92
VTA1YLR181C SCM4P32564 187 aa3.03□□□□□ -1.92
VTA1YLR181C CUE1P38428 203 aa3.03□□□□□ -1.92
VTA1YLR181C LSM1P47017 172 aaKnown RBP3.03□□□□□ -1.92
VTA1YLR181C GPI14P47088 403 aaKnown RBP3.03□□□□□ -1.92
VTA1YLR181C PLP1Q04004 230 aa3.03□□□□□ -1.92
VTA1YLR181C YOL024WQ08172 172 aa3.03□□□□□ -1.92
VTA1YLR181C YOR385WQ08909 290 aa3.03□□□□□ -1.92
VTA1YLR181C ODC2Q99297 307 aa3.03□□□□□ -1.92
VTA1YLR181C CSF1Q12150 2958 aa3.02□□□□□ -1.93
VTA1YLR181C Q0255P03881 472 aa3.02□□□□□ -1.93
VTA1YLR181C DSF1P0CX08 502 aa3.02□□□□□ -1.93
VTA1YLR181C YNR073CP0CX09 502 aa3.02□□□□□ -1.93
VTA1YLR181C RFA3P26755 122 aaKnown RBP3.02□□□□□ -1.93
VTA1YLR181C PAN3P36102 679 aaPredicted RBP3.02□□□□□ -1.93
VTA1YLR181C YHR125WP38831 101 aa3.02□□□□□ -1.93
VTA1YLR181C VMA7P39111 118 aa3.02□□□□□ -1.93
VTA1YLR181C SNX4P47057 423 aa3.02□□□□□ -1.93
VTA1YLR181C ORM1P53224 222 aa3.02□□□□□ -1.93
VTA1YLR181C YNG1Q08465 219 aa3.02□□□□□ -1.93
VTA1YLR181C MSA1Q08471 629 aa3.02□□□□□ -1.93
VTA1YLR181C PET20Q99373 253 aa3.02□□□□□ -1.93
VTA1YLR181C BEM2P39960 2167 aaKnown RBP3.02□□□□□ -1.93
VTA1YLR181C FMP27Q06179 2628 aa3.01□□□□□ -1.93
VTA1YLR181C ARG80P07249 177 aa3.01□□□□□ -1.93
VTA1YLR181C YHR032W-AP0C5N6 59 aa3.01□□□□□ -1.93
VTA1YLR181C UMP1P38293 148 aa3.01□□□□□ -1.93
VTA1YLR181C PHB1P40961 287 aa3.01□□□□□ -1.93
VTA1YLR181C NSA1P53136 463 aaPredicted RBP3.01□□□□□ -1.93
VTA1YLR181C JAC1P53193 184 aa3.01□□□□□ -1.93
VTA1YLR181C YDR248CQ03786 193 aa3.01□□□□□ -1.93
VTA1YLR181C YPL257WQ08974 193 aa3.01□□□□□ -1.93
VTA1YLR181C RTR2Q12378 196 aa3.01□□□□□ -1.93
VTA1YLR181C HUT1Q12520 339 aa3.01□□□□□ -1.93
VTA1YLR181C YPL229WQ99395 206 aa3.01□□□□□ -1.93
VTA1YLR181C COX5BP00425 151 aa3□□□□□ -1.93
VTA1YLR181C REP2P03872 296 aa3□□□□□ -1.93
VTA1YLR181C RPL30P14120 105 aaKnown RBP3□□□□□ -1.93
VTA1YLR181C CKS1P20486 150 aaKnown RBP3□□□□□ -1.93
VTA1YLR181C FIG1P38224 298 aa3□□□□□ -1.93
VTA1YLR181C SWM2P40342 146 aa3□□□□□ -1.93
VTA1YLR181C GNA1P43577 159 aaPredicted RBP3□□□□□ -1.93
VTA1YLR181C YMR279CQ03263 540 aa3□□□□□ -1.93
VTA1YLR181C RCE1Q03530 315 aa3□□□□□ -1.93
VTA1YLR181C SYM1Q06563 197 aa3□□□□□ -1.93
VTA1YLR181C RFU1Q08003 200 aa3□□□□□ -1.93
VTA1YLR181C USB1Q12208 290 aaKnown RBP3□□□□□ -1.93
VTA1YLR181C EMC6Q12431 108 aa3□□□□□ -1.93
VTA1YLR181C HTL1Q9URQ5 78 aa3□□□□□ -1.93
VTA1YLR181C MAG1P22134 296 aaKnown RBP2.99□□□□□ -1.93
VTA1YLR181C PEX4P29340 183 aa2.99□□□□□ -1.93
VTA1YLR181C FLX1P40464 311 aa2.99□□□□□ -1.93
VTA1YLR181C SMD3P43321 101 aaKnown RBP2.99□□□□□ -1.93
VTA1YLR181C HHT1P61830 136 aa2.99□□□□□ -1.93
VTA1YLR181C PRM15Q03262 622 aa2.99□□□□□ -1.93
VTA1YLR181C RAF1Q06891 181 aa2.99□□□□□ -1.93
VTA1YLR181C FIT3Q08907 204 aa2.99□□□□□ -1.93
VTA1YLR181C YGL194C-AQ2V2P6 80 aa2.99□□□□□ -1.93
VTA1YLR181C ADH3P07246 375 aaKnown RBP2.98□□□□□ -1.93
VTA1YLR181C PUT1P09368 476 aa2.98□□□□□ -1.93
VTA1YLR181C RPL35AP0CX84 120 aaKnown RBP2.98□□□□□ -1.93
VTA1YLR181C RPL35BP0CX85 120 aaKnown RBP2.98□□□□□ -1.93
VTA1YLR181C SEN2P16658 377 aa2.98□□□□□ -1.93
VTA1YLR181C TRR1P29509 319 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms